RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	HRASLS2	Q9NWW9	162 aa		11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	SEMA5B	Q9P283	1151 aa		11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	LNPEP	Q9UIQ6	1025 aa		11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	WASF3	Q9UPY6	502 aa		11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	RUVBL2	Q9Y230	463 aa	Known RBP	11.96	□□□□□ -0.49
PKN1-208	ENST00000586900	ACOT9	Q9Y305	439 aa		11.96	□□□□□ -0.49
PKN1-208	ENST00000586900		A0A087X1B8	175 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	IGHV5-10-1	A0A0J9YXX1	117 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	IQANK1	A0A1B0GTG1	560 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CCDC189	A1A4V9	331 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	OR6C74	A6NCV1	312 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ZNF839	A8K0R7	811 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CASC3	O15234	703 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CAPN5	O15484	640 aa	Predicted RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ALDOA	P04075	364 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	SHBG	P04278	402 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	C2	P06681	752 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	SLC35E2B	P0CK96	405 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CCDC166	P0CW27	439 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ERG	P11308	486 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	TYK2	P29597	1187 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CSF2RB	P32927	897 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	BDKRB1	P46663	353 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	PDX1	P52945	283 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	INHBC	P55103	352 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	BMPR2	Q13873	1038 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CYP2A13	Q16696	494 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ISX	Q2M1V0	245 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CCSMST1	Q4G0I0	132 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ANKS6	Q68DC2	871 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	RAPH1	Q70E73	1250 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	TMPRSS9	Q7Z410	1059 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ARHGAP22	Q7Z5H3	698 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CMC1	Q7Z7K0	106 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	SPNS2	Q8IVW8	549 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	OR2L8	Q8NGY9	312 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	JPH3	Q8WXH2	748 aa	Predicted RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	DLG3	Q92796	817 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	SLC22A18	Q96BI1	424 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	CCDC138	Q96M89	665 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	TRIM54	Q9BYV2	358 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	SYNDIG1	Q9H7V2	258 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	SNX15	Q9NRS6	342 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	TSR3	Q9UJK0	312 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	TLK1	Q9UKI8	766 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	ADAMTS6	Q9UKP5	1117 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900	PDE10A	Q9Y233	779 aa		11.95	□□□□□ -0.5
PKN1-208	ENST00000586900		A0A096LPK6	155 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	PIPSL	A2A3N6	862 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	C2orf74	A8MZ97	194 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	TRIM49D1	C9J1S8	452 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	BTN3A3	O00478	584 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	BTN3A1	O00481	513 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	HGS	O14964	777 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	CDH16	O75309	829 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	CS	O75390	466 aa	Known RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	FKBP9	O95302	570 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	MPO	P05164	745 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	ANKRD34C	P0C6C1	535 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	THRA	P10827	490 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	COL6A2	P12110	1019 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	HOXB3	P14651	431 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	CD1D	P15813	335 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	POLR2C	P19387	275 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	HIST1H2AD	P20671	130 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	PPM1F	P49593	454 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	AP1S2	P56377	157 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	KIR2DS3	Q14952	304 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	TAF1B	Q53T94	588 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	ARMC6	Q6NXE6	501 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	SBSN	Q6UWP8	590 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	PRSS42	Q7Z5A4	293 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	ADAMTSL2	Q86TH1	951 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	RIBC1	Q8N443	379 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	LINC01555	Q8NAE3	123 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	DENND1A	Q8TEH3	1009 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	LIN37	Q96GY3	246 aa	Predicted RBP	11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	CABS1	Q96KC9	395 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	HIST1H2AH	Q96KK5	128 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	PKP4	Q99569	1192 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	HIST1H2AJ	Q99878	128 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	H2AFJ	Q9BTM1	129 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	TMEM109	Q9BVC6	243 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	STRADB	Q9C0K7	418 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	SEMA6C	Q9H3T2	930 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	XKR8	Q9H6D3	395 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	NMRAL1	Q9HBL8	299 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	EURL	Q9NYK6	297 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	CTNNAL1	Q9UBT7	734 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	POMT2	Q9UKY4	750 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	PLAGL1	Q9UM63	463 aa		11.94	□□□□□ -0.5
PKN1-208	ENST00000586900	ANKRD12	Q6UB98	2062 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms