RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TMEM233B4DJY2 109 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 PLK4O00444 970 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 INPP4BO15327 924 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 TAPBPO15533 448 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 PLRG1O43660 514 aaKnown RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 MGRN1O60291 552 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 CCNT2O60583 730 aaKnown RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 MTX2O75431 263 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 SKAP2O75563 359 aaPredicted RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 RNASEH2AO75792 299 aaKnown RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 KLF8O95600 359 aaPredicted RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 APBB3O95704 486 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 GUCA1CO95843 209 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 HGFP14210 728 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 HOXB2P14652 356 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 PIK3R1P27986 724 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 TRIM23P36406 574 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 MPLP40238 635 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 MRPL19P49406 292 aaKnown RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 ACADVLP49748 655 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 CTSCP53634 463 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 SEC13P55735 322 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 TAS2R38P59533 333 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 STX1BP61266 288 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 KCNJ2P63252 427 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 MXRA7P84157 204 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 ZNF33BQ06732 778 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 STX5Q13190 355 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 CYLC2Q14093 348 aaPredicted RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 GSTA3Q16772 222 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 PHKG1Q16816 387 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 KHDC1Q4VXA5 237 aaKnown RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 C2orf27AQ580R0 203 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 WASHC2DQ5SRD0 308 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 STPG1Q5TH74 334 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 CLEC6AQ6EIG7 209 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 OGFOD2Q6N063 350 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 PARP9Q8IXQ6 854 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 KLHDC8AQ8IYD2 350 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 KIF2BQ8N4N8 673 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 OR2L2Q8NH16 312 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 HM13Q8TCT9 377 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 GANCQ8TET4 914 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 DLG3Q92796 817 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 C1QTNF2Q9BXJ5 285 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 SLC29A3Q9BZD2 475 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 OR2AG1Q9H205 316 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 NOL11Q9H8H0 719 aaKnown RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 RMI1Q9H9A7 625 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 TNFRSF12AQ9NP84 129 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 PHPT1Q9NRX4 125 aaPredicted RBP10.14□□□□□ -0.79
LIG3-203ENST00000585370 KLC4Q9NSK0 619 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 FBXL12Q9NXK8 326 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 ATXN10Q9UBB4 475 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 TRPS1Q9UHF7 1281 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 FIS1Q9Y3D6 152 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 ZZEF1O43149 2961 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 A0A1W2PP55 124 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 H3BM21 787 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 SLC28A1O00337 649 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 PPP6CO00743 305 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 PIP5K1BO14986 540 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 CHUKO15111 745 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 UGDHO60701 494 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 POP7O75817 140 aaKnown RBP10.13□□□□□ -0.79
LIG3-203ENST00000585370 WFS1O76024 890 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 OR4F21O95013 312 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 KRT16P08779 473 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 HOXC4P09017 264 aaPredicted RBP10.13□□□□□ -0.79
LIG3-203ENST00000585370 TSPAN8P19075 237 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 HMOX2P30519 316 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 PGM1P36871 562 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 HSPA7P48741 367 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 PCDH1Q08174 1060 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 WSCD2Q2TBF2 565 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 ZNF658BQ4V348 819 aaPredicted RBP10.13□□□□□ -0.79
LIG3-203ENST00000585370 C6orf163Q5TEZ5 329 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 TCEAL6Q6IPX3 200 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 CYB5D1Q6P9G0 228 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 C16orf89Q6UX73 402 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 TRAPPC5Q8IUR0 188 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 DDIASQ8IXT1 998 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 METTL6Q8TCB7 284 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 TSPEARQ8WU66 669 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 TCEAL3Q969E4 200 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 SIPA1Q96FS4 1042 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 CATSPER2Q96P56 530 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 LENG8Q96PV6 779 aaPredicted RBP10.13□□□□□ -0.79
LIG3-203ENST00000585370 TEX101Q9BY14 249 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 CADM1Q9BY67 442 aaKnown RBP10.13□□□□□ -0.79
LIG3-203ENST00000585370 AKTIPQ9H8T0 292 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 EFCAB1Q9HAE3 211 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 INVSQ9Y283 1065 aa10.13□□□□□ -0.79
LIG3-203ENST00000585370 COPG1Q9Y678 874 aaKnown RBP10.13□□□□□ -0.79
LIG3-203ENST00000585370 PIKFYVEQ9Y2I7 2098 aa10.12□□□□□ -0.79
LIG3-203ENST00000585370 A0A1W2PQF6 199 aa10.12□□□□□ -0.79
LIG3-203ENST00000585370 SERTM1A2A2V5 107 aa10.12□□□□□ -0.79
LIG3-203ENST00000585370 PSMD12O00232 456 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms