RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ATG10Q9H0Y0 220 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 CLK4Q9HAZ1 481 aaKnown RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 SPHK2Q9NRA0 654 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 OAZ3Q9UMX2 235 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 DOLKQ9UPQ8 538 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 SLC28A1O00337 649 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 MANBAO00462 879 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 LEFTY1O75610 366 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 CLDN9O95484 217 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 EEFSECP57772 596 aaKnown RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 SPANXN4Q5MJ08 99 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 GLYATQ6IB77 296 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 NCCRP1Q6ZVX7 275 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 GPR180Q86V85 440 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 SLC13A3Q8WWT9 602 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 VPS50Q96JG6 964 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 NSMCE2Q96MF7 247 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF641Q96N77 438 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 MCCC1Q96RQ3 725 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 CGREF1Q99674 301 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ELOVL6Q9H5J4 265 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 RPF2Q9H7B2 306 aaKnown RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 CDC14AQ9UNH5 594 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 DFNA5O60443 496 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 GMNNO75496 209 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 BMP10O95393 424 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 KRT6AP02538 564 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 KRT6BP04259 564 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ENO2P09104 434 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 EBLN1P0CF75 366 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 PTPN2P17706 415 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 NNMTP40261 264 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ETV3P41162 512 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 KRT6CP48668 564 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 HSD11B1LQ7Z5J1 315 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ANKFN1Q8N957 763 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 HM13Q8TCT9 377 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 PAIP1Q9H074 479 aaKnown RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 SLC32A1Q9H598 525 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 KCNH1O95259 989 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 GPIP06744 558 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 BMP2P12643 396 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ATP1B2P14415 290 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 MAPKAPK3Q16644 382 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ADIPOR2Q86V24 386 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ST13P5Q8NFI4 369 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-205ENST00000582730 TBCDQ9BTW9 1192 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 TMPRSS11EQ9UL52 423 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 SLC8A2Q9UPR5 921 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 WDR37Q9Y2I8 494 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
SRSF1-205ENST00000582730 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 SEC24DO94855 1032 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-205ENST00000582730 CBSLP0DN79 551 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 MSH3P20585 1137 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 CBSP35520 551 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 ESRRGP62508 458 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 RELAQ04206 551 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 PTCHD3Q3KNS1 767 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 TMEM215Q68D42 235 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 DLEU7Q6UYE1 221 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 GRASPQ7Z6J2 395 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-205ENST00000582730 TRPV3Q8NET8 790 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 FIG4Q92562 907 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 BIRC7Q96CA5 298 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 ZSWIM3Q96MP5 696 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 HEPHQ9BQS7 1158 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 PARVBQ9HBI1 364 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 AGPAT4Q9NRZ5 378 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 TBC1D23Q9NUY8 699 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 VAPAQ9P0L0 249 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 TRPS1Q9UHF7 1281 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 INSL6Q9Y581 213 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 ZFC3H1O60293 1989 aaKnown RBP13.34□□□□□ -0.27
SRSF1-205ENST00000582730 SCN8AQ9UQD0 1980 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 AGAP14A8MT82 685 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 ANKRD28O15084 1053 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 GSTA4O15217 222 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 PDYNP01213 254 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 PCNAP12004 261 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 EPCAMP16422 314 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 JAK1P23458 1154 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 AOAHP28039 575 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 HALP42357 657 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 MRPL19P49406 292 aaKnown RBP13.34□□□□□ -0.27
SRSF1-205ENST00000582730 PTPN5P54829 565 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 MAD2L1Q13257 205 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-205ENST00000582730 EPHX4Q8IUS5 362 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 GPR65Q8IYL9 337 aa13.34□□□□□ -0.27
SRSF1-205ENST00000582730 MRPL43Q8N983 215 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms