RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KLHL35Q6PF15 583 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 PAQR3Q6TCH7 311 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 DHRS13Q6UX07 377 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 ZNF761Q86XN6 746 aaPredicted RBP15.09■□□□□ 0.01
SS18-216ENST00000580751 CEP97Q8IW35 865 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 DCUN1D3Q8IWE4 304 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 OR5AR1Q8NGP9 310 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 CFAP61Q8NHU2 1237 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 DENND1AQ8TEH3 1009 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 ADAMTS14Q8WXS8 1223 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 AHCYL2Q96HN2 611 aaKnown RBP15.09■□□□□ 0.01
SS18-216ENST00000580751 HGH1Q9BTY7 390 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 VPS11Q9H270 941 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 LRRN3Q9H3W5 708 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 CAB39LQ9H9S4 337 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 NMRAL1Q9HBL8 299 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 PCMTD2Q9NV79 361 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 PLLPQ9Y342 182 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 CEP295Q9C0D2 2601 aa15.08■□□□□ 0
SS18-216ENST00000580751 PRAMEF33A0A0G2JMD5 474 aa15.08■□□□□ 0
SS18-216ENST00000580751 GOLGA8RI6L899 631 aa15.08■□□□□ 0
SS18-216ENST00000580751 NTN3O00634 580 aaPredicted RBP15.08■□□□□ 0
SS18-216ENST00000580751 UBXN7O94888 489 aa15.08■□□□□ 0
SS18-216ENST00000580751 CPNE6O95741 557 aa15.08■□□□□ 0
SS18-216ENST00000580751 ZNF37AP17032 561 aaPredicted RBP15.08■□□□□ 0
SS18-216ENST00000580751 CCL7P80098 99 aa15.08■□□□□ 0
SS18-216ENST00000580751 INSM1Q01101 510 aaPredicted RBP15.08■□□□□ 0
SS18-216ENST00000580751 AMZ1Q400G9 498 aa15.08■□□□□ 0
SS18-216ENST00000580751 CMC1Q7Z7K0 106 aa15.08■□□□□ 0
SS18-216ENST00000580751 MYO1HQ8N1T3 1032 aa15.08■□□□□ 0
SS18-216ENST00000580751 PHC3Q8NDX5 983 aa15.08■□□□□ 0
SS18-216ENST00000580751 RDH11Q8TC12 318 aa15.08■□□□□ 0
SS18-216ENST00000580751 MAGEC3Q8TD91 643 aa15.08■□□□□ 0
SS18-216ENST00000580751 LINGO1Q96FE5 620 aa15.08■□□□□ 0
SS18-216ENST00000580751 GFM1Q96RP9 751 aaKnown RBP15.08■□□□□ 0
SS18-216ENST00000580751 DPYSL5Q9BPU6 564 aa15.08■□□□□ 0
SS18-216ENST00000580751 SELENOSQ9BQE4 189 aa15.08■□□□□ 0
SS18-216ENST00000580751 TBC1D10AQ9BXI6 508 aa15.08■□□□□ 0
SS18-216ENST00000580751 DERL2Q9GZP9 239 aa15.08■□□□□ 0
SS18-216ENST00000580751 ZMYND15Q9H091 742 aa15.08■□□□□ 0
SS18-216ENST00000580751 TSR3Q9UJK0 312 aaKnown RBP15.08■□□□□ 0
SS18-216ENST00000580751 A0A1W2PQM1 296 aa15.07■□□□□ 0
SS18-216ENST00000580751 FAM221BA6H8Z2 402 aa15.07■□□□□ 0
SS18-216ENST00000580751 D6RAR5 112 aa15.07■□□□□ 0
SS18-216ENST00000580751 B4GAT1O43505 415 aa15.07■□□□□ 0
SS18-216ENST00000580751 CATP04040 527 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 RBP1P09455 135 aa15.07■□□□□ 0
SS18-216ENST00000580751 LTA4HP09960 611 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 CREB1P16220 341 aa15.07■□□□□ 0
SS18-216ENST00000580751 CD1CP29017 333 aa15.07■□□□□ 0
SS18-216ENST00000580751 RPA3P35244 121 aaPredicted RBP15.07■□□□□ 0
SS18-216ENST00000580751 CAPZBP47756 277 aa15.07■□□□□ 0
SS18-216ENST00000580751 PRKG2Q13237 762 aa15.07■□□□□ 0
SS18-216ENST00000580751 SQSTM1Q13501 440 aa15.07■□□□□ 0
SS18-216ENST00000580751 ACAP2Q15057 778 aa15.07■□□□□ 0
SS18-216ENST00000580751 RBM44Q6ZP01 1051 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 PIWIL4Q7Z3Z4 852 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 GALNT15Q8N3T1 639 aa15.07■□□□□ 0
SS18-216ENST00000580751 OR52E1Q8NGJ3 308 aa15.07■□□□□ 0
SS18-216ENST00000580751 TCP10LQ8TDR4 215 aa15.07■□□□□ 0
SS18-216ENST00000580751 EEF1AKMT1Q8WVE0 214 aa15.07■□□□□ 0
SS18-216ENST00000580751 LCN9Q8WX39 176 aa15.07■□□□□ 0
SS18-216ENST00000580751 RAD51AP1Q96B01 352 aa15.07■□□□□ 0
SS18-216ENST00000580751 TFB2MQ9H5Q4 396 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 INTS9Q9NV88 658 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 RUVBL2Q9Y230 463 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 TDRKHQ9Y2W6 561 aaKnown RBP15.07■□□□□ 0
SS18-216ENST00000580751 SPEGQ15772 3267 aa15.07■□□□□ 0
SS18-216ENST00000580751 NCOR2Q9Y618 2525 aa15.06■□□□□ 0
SS18-216ENST00000580751 FOXO6A8MYZ6 492 aa15.06■□□□□ 0
SS18-216ENST00000580751 BIRC5O15392 142 aa15.06■□□□□ 0
SS18-216ENST00000580751 PHGDHO43175 533 aaKnown RBP15.06■□□□□ 0
SS18-216ENST00000580751 SPAG7O75391 227 aa15.06■□□□□ 0
SS18-216ENST00000580751 PSIP1O75475 530 aaKnown RBP15.06■□□□□ 0
SS18-216ENST00000580751 C1orf105O95561 183 aa15.06■□□□□ 0
SS18-216ENST00000580751 TSPAN12O95859 305 aa15.06■□□□□ 0
SS18-216ENST00000580751 PROS1P07225 676 aa15.06■□□□□ 0
SS18-216ENST00000580751 C8GP07360 202 aa15.06■□□□□ 0
SS18-216ENST00000580751 DHRS4L1P0CG22 281 aa15.06■□□□□ 0
SS18-216ENST00000580751 AMD1P17707 334 aa15.06■□□□□ 0
SS18-216ENST00000580751 SHMT2P34897 504 aa15.06■□□□□ 0
SS18-216ENST00000580751 ETV4P43268 484 aa15.06■□□□□ 0
SS18-216ENST00000580751 SP140Q13342 867 aa15.06■□□□□ 0
SS18-216ENST00000580751 N4BP2L1Q5TBK1 243 aaPredicted RBP15.06■□□□□ 0
SS18-216ENST00000580751 HES3Q5TGS1 186 aa15.06■□□□□ 0
SS18-216ENST00000580751 RAB44Q7Z6P3 723 aaPredicted RBP15.06■□□□□ 0
SS18-216ENST00000580751 OOSP2Q86WS3 158 aa15.06■□□□□ 0
SS18-216ENST00000580751 TMPRSS12Q86WS5 348 aa15.06■□□□□ 0
SS18-216ENST00000580751 CENPLQ8N0S6 344 aaPredicted RBP15.06■□□□□ 0
SS18-216ENST00000580751 RAB42Q8N4Z0 105 aa15.06■□□□□ 0
SS18-216ENST00000580751 RHEBL1Q8TAI7 183 aa15.06■□□□□ 0
SS18-216ENST00000580751 ASB11Q8WXH4 323 aa15.06■□□□□ 0
SS18-216ENST00000580751 ZBTB9Q96C00 473 aa15.06■□□□□ 0
SS18-216ENST00000580751 MRPL57Q9BQC6 102 aaKnown RBP15.06■□□□□ 0
SS18-216ENST00000580751 RAB11FIP5Q9BXF6 653 aa15.06■□□□□ 0
SS18-216ENST00000580751 SRMSQ9H3Y6 488 aa15.06■□□□□ 0
SS18-216ENST00000580751 UNC13CQ8NB66 2214 aa15.06■□□□□ 0
SS18-216ENST00000580751 ARHGEF33A8MVX0 844 aa15.05■□□□□ -0
SS18-216ENST00000580751 MATN2O00339 956 aa15.05■□□□□ -0
SS18-216ENST00000580751 SLC16A5O15375 505 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms