RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
COPS3-214ENST00000577246 PCDH17O14917 1159 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 CST8O60676 142 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 AP2A2O94973 939 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 AGTP01019 485 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 PDHA2P29803 388 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 ARG2P78540 354 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 PLOD1Q02809 727 aaPredicted RBP12.84□□□□□ -0.35
COPS3-214ENST00000577246 PRPSAP1Q14558 356 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 KIRREL2Q6UWL6 708 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 MFSD7Q6UXD7 560 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 TTLL10Q6ZVT0 673 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 DNAJC22Q8N4W6 341 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 ZNF808Q8N4W9 903 aaPredicted RBP12.84□□□□□ -0.35
COPS3-214ENST00000577246 SLC35G2Q8TBE7 412 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 ITLN2Q8WWU7 325 aaPredicted RBP12.84□□□□□ -0.35
COPS3-214ENST00000577246 NR4A3Q92570 626 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 PPP1R2P1Q96PQ5 205 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 PACSIN1Q9BY11 444 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 GBA3Q9H227 469 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 EURLQ9NYK6 297 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 SAE1Q9UBE0 346 aaPredicted RBP12.84□□□□□ -0.35
COPS3-214ENST00000577246 AAR2Q9Y312 384 aaKnown RBP12.84□□□□□ -0.35
COPS3-214ENST00000577246 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 C2CD3Q4AC94 2353 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 TRAV17A0A0B4J275 112 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 ISM1B1AKI9 464 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 HCRTR1O43613 425 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 USP1O94782 785 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 ONECUT2O95948 504 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 MYBL2P10244 700 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 PECAM1P16284 738 aaPredicted RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 FDXRP22570 491 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 ACRV1P26436 265 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 HTR1EP28566 365 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 PBX1P40424 430 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 CDKN2BP42772 138 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 CARSP49589 748 aaKnown RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 CASP6P55212 293 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 RBPJQ06330 500 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 NKG7Q16617 165 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 ZNF630Q2M218 657 aaPredicted RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 ZNF658BQ4V348 819 aaPredicted RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 TCTE1Q5JU00 501 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 KAZNQ674X7 775 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 TMEM207Q6UWW9 146 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 GFRALQ6UXV0 394 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 LINC00696Q6ZRV3 163 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 OR5AR1Q8NGP9 310 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 OR1N1Q8NGS0 311 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 OR5K2Q8NHB8 316 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 CCDC110Q8TBZ0 833 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 SLC22A18Q96BI1 424 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 QKIQ96PU8 341 aaKnown RBP eCLIP12.83□□□□□ -0.36
COPS3-214ENST00000577246 SPSB2Q99619 263 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 SLC22A11Q9NSA0 550 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 INTS7Q9NVH2 962 aaKnown RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 FEZ2Q9UHY8 353 aaPredicted RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 TDRKHQ9Y2W6 561 aaKnown RBP12.83□□□□□ -0.36
COPS3-214ENST00000577246 PIKFYVEQ9Y2I7 2098 aa12.83□□□□□ -0.36
COPS3-214ENST00000577246 APCP25054 2843 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TRGV8A0A0C4DH27 118 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 F8W8V4 182 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 DSCR3O14972 297 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 SPOPO43791 374 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 ALOX12BO75342 701 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 AP2A1O95782 977 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 HPP00738 406 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 CRYABP02511 175 aaKnown RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 FTH1P02794 183 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TNNT1P13805 278 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 MC4RP32245 332 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 UBASH3AP57075 661 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 KCNK10P57789 538 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 FOXL2P58012 376 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TMPRSS15P98073 1019 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 GRM7Q14831 915 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TAZQ16635 292 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 SYTL3Q4VX76 610 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TFDP3Q5H9I0 405 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 ZC3H12BQ5HYM0 836 aaKnown RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 ZNF324BQ6AW86 544 aaPredicted RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 RANBP10Q6VN20 620 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 MRGPRGQ86SM5 289 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 MCATQ8IVS2 390 aaKnown RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 KBTBD2Q8IY47 623 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TTC29Q8NA56 475 aaPredicted RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 OR11G2Q8NGC1 345 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 OR13C4Q8NGS5 318 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 NRTNQ99748 197 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 FAM96AQ9H5X1 160 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
COPS3-214ENST00000577246 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 SPHK1Q9NYA1 384 aa12.82□□□□□ -0.36
COPS3-214ENST00000577246 TRBV5-4A0A0C4DH59 114 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 CCDC78A2IDD5 438 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 CCL21O00585 134 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 MAP2K7O14733 419 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms