RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZFP90Q8TF47 636 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 CPPED1Q9BRF8 314 aaPredicted RBP18.65■□□□□ 0.58
SCARF1-206ENST00000573852 NACA2Q9H009 215 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 WWOXQ9NZC7 414 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 KRBA1A5PL33 1030 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 FAM220BPB1ANY3 271 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 MANBAO00462 879 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 KPNA4O00629 521 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 MYCLP1P12525 358 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 BCKDHAP12694 445 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 BMP1P13497 986 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 CD6P30203 668 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 MAP2K4P45985 399 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 SMU1Q2TAY7 513 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 USP39Q53GS9 565 aaKnown RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 PERM1Q5SV97 790 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 LAIR1Q6GTX8 287 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 CYP4Z1Q86W10 505 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 GALNT13Q8IUC8 556 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 CHCHD4Q8N4Q1 142 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 TAMM41Q96BW9 452 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 FAM120BQ96EK7 910 aaKnown RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 PYURFQ96I23 114 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 INPP5KQ9BT40 448 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 TNKS2Q9H2K2 1166 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 SERHLQ9NQF3 203 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 GKN1Q9NS71 199 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 C1orf109Q9NX04 203 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 H0Y626 953 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 GABARAPO95166 117 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 SLC25A14O95258 325 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 TRIM16O95361 564 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 ANGPTL1O95841 491 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 FMO3P31513 532 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 HPCAL1P37235 193 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 ADPRMQ3LIE5 342 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 ZC3H12BQ5HYM0 836 aaKnown RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 MBOAT1Q6ZNC8 495 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 HIPK1Q86Z02 1210 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 NDNFQ8TB73 568 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 ZNF566Q969W8 418 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 MROQ9BYG7 248 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 HMG20AQ9NP66 347 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 INTS6Q9UL03 887 aaKnown RBP18.64■□□□□ 0.57
SCARF1-206ENST00000573852 PCDHGB1Q9Y5G3 927 aa18.64■□□□□ 0.57
SCARF1-206ENST00000573852 GAPDHSO14556 408 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ALDH4A1P30038 563 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 LSM3P62310 102 aaKnown RBP18.63■□□□□ 0.57
SCARF1-206ENST00000573852 IFITM3Q01628 133 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 CARD16Q5EG05 197 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 CXorf57Q6NSI4 855 aaKnown RBP18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ANKRD46Q86W74 232 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 TRIB2Q92519 343 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ALOXE3Q9BYJ1 711 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 LHX3Q9UBR4 397 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ORC6Q9Y5N6 252 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ITGAMP11215 1152 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 CYP4B1P13584 511 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ZNF7P17097 686 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ACVR2AP27037 513 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 HMGCLP35914 325 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 RGS4P49798 205 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 IL18R1Q13478 541 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 SIM2Q14190 667 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-206ENST00000573852 MBTPS1Q14703 1052 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ATXN7L2Q5T6C5 722 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-206ENST00000573852 CPZQ66K79 652 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 B3GNT8Q7Z7M8 397 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 OR7A2PQ8NGA2 310 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 RETREG1Q9H6L5 497 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 ASIC5Q9NY37 505 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 DLGAP4Q9Y2H0 992 aa18.63■□□□□ 0.57
SCARF1-206ENST00000573852 TTC36A6NLP5 189 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 GOLGA8CPA6NN73 597 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 FZD6O60353 706 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 PRAMEF1O95521 474 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 IGFBP5P24593 272 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 CORO1AP31146 461 aaKnown RBP18.62■□□□□ 0.57
SCARF1-206ENST00000573852 RFX4Q33E94 735 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 CERS6Q6ZMG9 384 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 CEP68Q76N32 757 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 LRRC8DQ7L1W4 858 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 PIK3C3Q8NEB9 887 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 WBP2Q969T9 261 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 VMP1Q96GC9 406 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 HECAQ9UBI9 543 aaPredicted RBP18.62■□□□□ 0.57
SCARF1-206ENST00000573852 HCSTQ9UBK5 93 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 PCDHGA10Q9Y5H3 936 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 A0A1B0GVM2 712 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 TMEM247A6NEH6 219 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 M0QX08 132 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 ERN1O75460 977 aaKnown RBP18.62■□□□□ 0.57
SCARF1-206ENST00000573852 JRKO75564 520 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 RECQL5O94762 991 aaPredicted RBP18.62■□□□□ 0.57
SCARF1-206ENST00000573852 WDR47O94967 919 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 PTPN6P29350 595 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 CDKN2CP42773 168 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 NPTX1Q15818 432 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 RTP2Q5QGT7 225 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 LRIF1Q5T3J3 769 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms