RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 GPC4O75487 556 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 PAMP19021 973 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 AOAHP28039 575 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 FMO4P31512 558 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 RAB28P51157 221 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 TTC23LQ6PF05 361 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 OTOAQ7RTW8 1153 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 LRRC6Q86X45 466 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 FAM20CQ8IXL6 584 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 DSELQ8IZU8 1212 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 C17orf53Q8N3J3 647 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 MPP5Q8N3R9 675 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 LMNTD1Q8N9Z9 388 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 SEC14L1Q92503 715 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 FAM136AQ96C01 138 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 ABHD17AQ96GS6 310 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 TCTN2Q96GX1 697 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 CAPZA3Q96KX2 299 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 IL17FQ96PD4 163 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 MRM3Q9HC36 420 aaKnown RBP12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 FAM60AQ9NP50 221 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 SLC39A10Q9ULF5 831 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 NEU2Q9Y3R4 380 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 GOLGA6L10A0A0M3HER8 536 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 KPNA5O15131 536 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF749O43361 778 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 SUV39H1O43463 412 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 OR2B3O76000 313 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 TMEM63AO94886 807 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 MSL3P1P0C860 447 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 ARNTP27540 789 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 PKLRP30613 574 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 KIR2DS3Q14952 304 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 ZIC1Q15915 447 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 KYNUQ16719 465 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 PTCHD3Q3KNS1 767 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 LACTB2Q53H82 288 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF789Q5FWF6 425 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 CTSL3PQ5NE16 218 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 PLEKHS1Q5SXH7 462 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 RNF187Q5TA31 235 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 IZUMO3Q5VZ72 239 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 LCN10Q6JVE6 187 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 UNC5DQ6UXZ4 953 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 SYVN1Q86TM6 617 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 DCUN1D3Q8IWE4 304 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 SYTL1Q8IYJ3 562 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 ENDOVQ8N8Q3 282 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF669Q96BR6 464 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 LRFN5Q96NI6 719 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 TRIM56Q9BRZ2 755 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 IL1RAPL1Q9NZN1 696 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 SNX7Q9UNH6 387 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 RUVBL2Q9Y230 463 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 CRYL1Q9Y2S2 319 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 PIEZO2Q9H5I5 2752 aa12.26□□□□□ -0.45
NPLOC4-213ENST00000573519 MKRN2OSH3BPM6 223 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 CES2O00748 559 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 NIPSNAP2O75323 286 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 RFPL1O75677 317 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 SLCO2B1O94956 709 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 HBQ1P09105 142 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 TCP1P17987 556 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 CHRM3P20309 590 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 AGXTP21549 392 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 CD9P21926 228 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 RPS3P23396 243 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 PEBP1P30086 187 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 RORAP35398 523 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 MAGEA6P43360 314 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 BDKRB1P46663 353 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 FNTAP49354 379 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 IL10RAQ13651 578 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 DHX34Q14147 1143 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 UGT8Q16880 541 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 SLC5A12Q1EHB4 618 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 C1orf189Q5VU69 101 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 FAM69BQ5VUD6 431 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 KIAA0930Q6ICG6 404 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 CNSTQ6PJW8 725 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 LINC01555Q8NAE3 123 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 FLVCR1-AS1Q8TAF5 88 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 GRK7Q8WTQ7 553 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 FOPNLQ96NB1 174 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 NAPGQ99747 312 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 SPRTNQ9H040 489 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 DDX47Q9H0S4 455 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 TP53TG5Q9Y2B4 290 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 NFS1Q9Y697 457 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF462Q96JM2 2506 aa12.25□□□□□ -0.45
NPLOC4-213ENST00000573519 CTAGE9A4FU28 777 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 ARGFXA6NJG6 315 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms