RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	SNX2	O60749	519 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	KCNJ13	O60928	360 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	RFPL2	O75678	378 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	CXCL14	O95715	111 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	LRG1	P02750	347 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	ALPL	P05186	524 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	GSN	P06396	782 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	C8A	P07357	584 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	PAM	P19021	973 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	CR2	P20023	1033 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	SLC12A2	P55011	1212 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	CTBP1	Q13363	440 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	CSHL1	Q14406	222 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	UGT3A2	Q3SY77	523 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	TMEM240	Q5SV17	173 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	RNF219	Q5W0B1	726 aa	Predicted RBP	11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	TTC23	Q5W5X9	447 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	FAM219B	Q5XKK7	198 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	PTRH1	Q86Y79	214 aa	Known RBP	11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	LACC1	Q8IV20	430 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	CCDC28A	Q8IWP9	274 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	FAM217A	Q8IXS0	508 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	MIER2	Q8N344	545 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	CHDH	Q8NE62	594 aa	Predicted RBP	11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	OR13J1	Q8NGT2	312 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	DOCK6	Q96HP0	2047 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	UBXN10	Q96LJ8	280 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	RNF145	Q96MT1	663 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	TRIB3	Q96RU7	358 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	TRIM54	Q9BYV2	358 aa		11.75	□□□□□ -0.53
SPG7-222	ENST00000569820	ZNF99	A8MXY4	864 aa	Predicted RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PAPSS2	O95340	614 aa	Predicted RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	C1R	P00736	705 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ADH1A	P07327	375 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	HLA-DPA1	P20036	260 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ALDH4A1	P30038	563 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PKLR	P30613	574 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PPP5C	P53041	499 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TAS2R39	P59534	338 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ERVFC1	P60507	584 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	COPZ1	P61923	177 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ARF5	P84085	180 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	LIPE	Q05469	1076 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	SLC14A2	Q15849	920 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	MEP1A	Q16819	746 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	SMU1	Q2TAY7	513 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ADPRM	Q3LIE5	342 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	RABL3	Q5HYI8	236 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TECRL	Q5HYJ1	363 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ZNF470	Q6ECI4	717 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	RNF135	Q8IUD6	432 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	DNAJB14	Q8TBM8	379 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TRIM63	Q969Q1	353 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TMEM125	Q96AQ2	219 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	VPS33A	Q96AX1	596 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PHF21B	Q96EK2	531 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	C3orf30	Q96M34	536 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	NODAL	Q96S42	347 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TCF25	Q9BQ70	676 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	CINP	Q9BW66	212 aa	Predicted RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	CCDC90B	Q9GZT6	254 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TRIT1	Q9H3H1	467 aa	Known RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	AKTIP	Q9H8T0	292 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	NECTIN3	Q9NQS3	549 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PCDHB3	Q9Y5E6	796 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	IRAK3	Q9Y616	596 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ISPD	A4D126	451 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	CBX4	O00257	560 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TAF4	O00268	1085 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	AXIN1	O15169	862 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	LDB2	O43679	373 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TBL1X	O60907	577 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	DLGAP3	O95886	979 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	CD160	O95971	181 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	EPO	P01588	193 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	FGF1	P05230	155 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	SERPINF2	P08697	491 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	GRK3	P35626	688 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	NUDT1	P36639	197 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	DSTN	P60981	165 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	LSM3	P62310	102 aa	Known RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	NFYC	Q13952	458 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	GALNT3	Q14435	633 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TMEM236	Q5W0B7	351 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ZNF783	Q6ZMS7	281 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	CCDC149	Q6ZUS6	474 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ADAMTSL2	Q86TH1	951 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	STK32C	Q86UX6	486 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	HJURP	Q8NCD3	748 aa	Predicted RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	GALNT6	Q8NCL4	622 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	KREMEN2	Q8NCW0	462 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	WFDC5	Q8TCV5	224 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PHF10	Q8WUB8	498 aa	Known RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	MRPS31	Q92665	395 aa	Known RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	AURKB	Q96GD4	344 aa	Predicted RBP	11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	EXOC2	Q96KP1	924 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	TOR3A	Q9H497	397 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	ABCB10	Q9NRK6	738 aa		11.74	□□□□□ -0.53
SPG7-222	ENST00000569820	PMF1-BGLAP	U3KQ54	211 aa		11.74	□□□□□ -0.53

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