RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 CDK3Q00526 305 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 FASTKD3Q14CZ7 662 aaKnown RBP2.78□□□□□ -1.96
UBR1-209ENST00000569243 IL27RAQ6UWB1 636 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 GPRIN3Q6ZVF9 776 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 LACC1Q8IV20 430 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 RPAP2Q8IXW5 612 aaPredicted RBP2.78□□□□□ -1.96
UBR1-209ENST00000569243 OR4C3Q8NH37 302 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 ZFAND2BQ8WV99 257 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 C16orf70Q9BSU1 422 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 SPATC1LQ9H0A9 340 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 CHMP1AQ9HD42 196 aaPredicted RBP2.78□□□□□ -1.96
UBR1-209ENST00000569243 EIF2B3Q9NR50 452 aaKnown RBP2.78□□□□□ -1.96
UBR1-209ENST00000569243 SDR39U1Q9NRG7 319 aaPredicted RBP2.78□□□□□ -1.96
UBR1-209ENST00000569243 SPHK1Q9NYA1 384 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 PSD3Q9NYI0 1048 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 TAS2R14Q9NYV8 317 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 RHCGQ9UBD6 479 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 EPHA6Q9UF33 1036 aa2.78□□□□□ -1.96
UBR1-209ENST00000569243 WBP11Q9Y2W2 641 aaKnown RBP2.78□□□□□ -1.96
UBR1-209ENST00000569243 MPTX1A8MV57 137 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 MED24O75448 989 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 PIK3R1P27986 724 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 RBMS1P29558 406 aaKnown RBP2.77□□□□□ -1.97
UBR1-209ENST00000569243 MAPK4P31152 587 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 SUOXP51687 545 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 MFAP4P55083 255 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 GRAPQ13588 217 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 IRF3Q14653 427 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 RAB41Q5JT25 222 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 DHRS7BQ6IAN0 325 aaPredicted RBP2.77□□□□□ -1.97
UBR1-209ENST00000569243 HAUS6Q7Z4H7 955 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 HOGA1Q86XE5 327 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 TTC39CQ8N584 583 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 TRIML1Q8N9V2 468 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 TEX19Q8NA77 164 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 OLIG1Q8TAK6 271 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 FNBP1Q96RU3 617 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 SRSF8Q9BRL6 282 aaKnown RBP2.77□□□□□ -1.97
UBR1-209ENST00000569243 LMF2Q9BU23 707 aaKnown RBP2.77□□□□□ -1.97
UBR1-209ENST00000569243 SYNCQ9H7C4 482 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 WSB2Q9NYS7 404 aaPredicted RBP2.77□□□□□ -1.97
UBR1-209ENST00000569243 LARSQ9P2J5 1176 aaKnown RBP2.77□□□□□ -1.97
UBR1-209ENST00000569243 RARRES3Q9UL19 164 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 ZNF148Q9UQR1 794 aa2.77□□□□□ -1.97
UBR1-209ENST00000569243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.77□□□□□ -1.97
UBR1-209ENST00000569243 C15orf61A6NNL5 157 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 AGAP14A8MT82 685 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 VILLO15195 856 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 PRAMEF11O60813 436 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 WDPCPO95876 746 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 IGHV3-13P01766 116 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 VTNP04004 478 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 IGHV4-31P0DP07 118 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 NKX2-1P43699 371 aaPredicted RBP2.76□□□□□ -1.97
UBR1-209ENST00000569243 SLC15A1P46059 708 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 PDX1P52945 283 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 LY6DQ14210 128 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 KRT33BQ14525 404 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 C20orf194Q5TEA3 1177 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 TMCO3Q6UWJ1 677 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 MARCH9Q86YJ5 346 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 ARHGAP45Q92619 1136 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 AZIN2Q96A70 460 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 GAL3ST4Q96RP7 486 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 CPVLQ9H3G5 476 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 SMARCAD1Q9H4L7 1026 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 FGF21Q9NSA1 209 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 SUCLA2Q9P2R7 463 aaPredicted RBP2.76□□□□□ -1.97
UBR1-209ENST00000569243 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 HACL1Q9UJ83 578 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 TUBE1Q9UJT0 475 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 PLAGL1Q9UM63 463 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 HCFC1P51610 2035 aa2.76□□□□□ -1.97
UBR1-209ENST00000569243 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 ARID4BQ4LE39 1312 aaPredicted RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 LOC100509620A0A075B734 347 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 HEPACAM2A8MVW5 462 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 KLLNB2CW77 178 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 PTGES3LE9PB15 166 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 IDH3BO43837 385 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 OR10H2O60403 315 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 TSPAN1O60635 241 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 CAPN3P20807 821 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 HADHAP40939 763 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 TMEM50BP56557 158 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 B3GALT5-AS1P59052 145 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 C15orf59Q2T9L4 293 aaPredicted RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 DUSP28Q4G0W2 176 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 CCDC30Q5VVM6 783 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 LYSMD4Q5XG99 296 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 FAM180BQ6P0A1 224 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 C1orf122Q6ZSJ8 110 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 TBC1D1Q86TI0 1168 aaPredicted RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 LDB1Q86U70 411 aaPredicted RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 ADIPOR2Q86V24 386 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 NUDT13Q86X67 352 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 KIRREL3Q8IZU9 778 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 CCDC107Q8WV48 283 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 SAT2Q96F10 170 aaPredicted RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 SOSTQ9BQB4 213 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms