RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 UBAP2LQ14157 1087 aaKnown RBP22.9■■□□□ 1.26
RAB40C-209ENST00000565511 MEI1Q5TIA1 1274 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 C2orf73Q8N5S3 287 aaPredicted RBP22.9■■□□□ 1.26
RAB40C-209ENST00000565511 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.9■■□□□ 1.262e-6■■■■■ 54.9
RAB40C-209ENST00000565511 NUDT9Q9BW91 350 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 CHRAC1Q9NRG0 131 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 ANKMY1Q9P2S6 941 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 PCDHGA9Q9Y5G4 932 aaKnown RBP22.9■■□□□ 1.26
RAB40C-209ENST00000565511 KRT87PA6NCN2 255 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 GPC4O75487 556 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 KLF7O75840 302 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-209ENST00000565511 OR2B3O76000 313 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 LYPLAL1Q5VWZ2 237 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 PAPD7Q5XG87 772 aaKnown RBP22.89■■□□□ 1.25
RAB40C-209ENST00000565511 TAX1BP1Q86VP1 789 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 DNAJC22Q8N4W6 341 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 FDCSPQ8NFU4 85 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 TCTN2Q96GX1 697 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 GBP5Q96PP8 586 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 OR6C2Q9NZP2 312 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 DHCR7Q9UBM7 475 aaKnown RBP22.89■■□□□ 1.25
RAB40C-209ENST00000565511 POLG2Q9UHN1 485 aa22.89■■□□□ 1.25
RAB40C-209ENST00000565511 NBPF19A0A087WUL8 3843 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 ISM1B1AKI9 464 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 MASP2O00187 686 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 SESN2P58004 480 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-209ENST00000565511 HSPA14Q0VDF9 509 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 SLC9A5Q14940 896 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 KYNUQ16719 465 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 SLC5A12Q1EHB4 618 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 FASTKD1Q53R41 847 aaKnown RBP22.88■■□□□ 1.25
RAB40C-209ENST00000565511 PRR30Q53SZ7 412 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-209ENST00000565511 ZNF655Q8N720 491 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-209ENST00000565511 COL26A1Q96A83 441 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 SGSM3Q96HU1 749 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 SLC7A5P2Q9GIP4 190 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 PAK5Q9P286 719 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 NUP210LQ5VU65 1888 aa22.88■■□□□ 1.25
RAB40C-209ENST00000565511 A6NL46 340 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 ZNF185O15231 689 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 SORBS2O94875 1100 aaKnown RBP22.87■■□□□ 1.25
RAB40C-209ENST00000565511 GAS8O95995 478 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 MAGP20916 626 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 NMBRP28336 390 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 GCGRP47871 477 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 PRAMEP78395 509 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 RPS6KA1Q15418 735 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 HOOK3Q86VS8 718 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 CCDC89Q8N998 374 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 PPHLN1Q8NEY8 458 aaKnown RBP22.87■■□□□ 1.25
RAB40C-209ENST00000565511 CFAP61Q8NHU2 1237 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 TSGA10Q9BZW7 698 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 CHRNA10Q9GZZ6 450 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 SLC22A11Q9NSA0 550 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 TREX1Q9NSU2 369 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 CATSPERZQ9NTU4 200 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 LUZP4Q9P127 313 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 PCM1Q15154 2024 aa22.87■■□□□ 1.25
RAB40C-209ENST00000565511 UTP20O75691 2785 aaKnown RBP22.87■■□□□ 1.25
RAB40C-209ENST00000565511 ZSCAN9O15535 394 aaPredicted RBP22.86■■□□□ 1.25
RAB40C-209ENST00000565511 MAP3K7O43318 606 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 ITGAXP20702 1163 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 ARNTP27540 789 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 AOAHP28039 575 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 OTX2P32243 289 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 RAPSNQ13702 412 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 DNAJC21Q5F1R6 531 aaKnown RBP22.86■■□□□ 1.25
RAB40C-209ENST00000565511 RHBDD2Q6NTF9 364 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 MRGPREQ86SM8 312 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 GPR135Q8IZ08 494 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 CARD6Q9BX69 1037 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 P2RY12Q9H244 342 aa22.86■■□□□ 1.25
RAB40C-209ENST00000565511 RUVBL2Q9Y230 463 aaKnown RBP22.86■■□□□ 1.25
RAB40C-209ENST00000565511 PRRC2CQ9Y520 2896 aaKnown RBP22.85■■□□□ 1.25
RAB40C-209ENST00000565511 TCRBV7S3A2A0A539 114 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 C9J4A7 227 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 KRT86O43790 486 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 BDKRB1P46663 353 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 KCNJ1P48048 391 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 RAB28P51157 221 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 PLOD1Q02809 727 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-209ENST00000565511 KIR2DS3Q14952 304 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 CCSMST1Q4G0I0 132 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 MLIPQ5VWP3 458 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 CES3Q6UWW8 571 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 SPNS2Q8IVW8 549 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 Q8NA96 180 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 N4BP2L2Q92802 583 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-209ENST00000565511 DPH2Q9BQC3 489 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-209ENST00000565511 MFRPQ9BY79 579 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 EIF2B3Q9NR50 452 aaKnown RBP22.85■■□□□ 1.25
RAB40C-209ENST00000565511 NFS1Q9Y697 457 aa22.85■■□□□ 1.25
RAB40C-209ENST00000565511 PRMT5O14744 637 aaPredicted RBP22.84■■□□□ 1.25
RAB40C-209ENST00000565511 CD3EAPO15446 510 aaKnown RBP22.84■■□□□ 1.25
RAB40C-209ENST00000565511 SLCO2B1O94956 709 aa22.84■■□□□ 1.25
RAB40C-209ENST00000565511 HBQ1P09105 142 aa22.84■■□□□ 1.25
RAB40C-209ENST00000565511 CCNG2Q16589 344 aa22.84■■□□□ 1.25
RAB40C-209ENST00000565511 PCID2Q5JVF3 399 aa22.84■■□□□ 1.25
RAB40C-209ENST00000565511 CTSL3PQ5NE16 218 aa22.84■■□□□ 1.25
RAB40C-209ENST00000565511 FCRL6Q6DN72 434 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms