RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 LRIF1Q5T3J3 769 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 LIPJQ5W064 366 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ATG9BQ674R7 924 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ZNF765Q7L2R6 523 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CYP2U1Q7Z449 544 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 TMCO2Q7Z6W1 182 aaPredicted RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 NLRP8Q86W28 1048 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SPPL2CQ8IUH8 684 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 FBXO15Q8NCQ5 510 aaPredicted RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 CSGALNACT1Q8TDX6 532 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 FRS2Q8WU20 508 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 BHMTQ93088 406 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ESAMQ96AP7 390 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 VPS33AQ96AX1 596 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 TESCQ96BS2 214 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 PAWRQ96IZ0 340 aaKnown RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 FCRL1Q96LA6 429 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 TEX37Q96LM6 180 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SPSB2Q99619 263 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 BDH2Q9BUT1 245 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 C1orf50Q9BV19 199 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SPATA16Q9BXB7 569 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 UGT2B28Q9BY64 529 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 RMND5AQ9H871 391 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ACTR8Q9H981 624 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 IL1RL2Q9HB29 575 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 VCX3AQ9NNX9 186 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 DNAJC11Q9NVH1 559 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ARL15Q9NXU5 204 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 KLQ9UEF7 1012 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ZNF639Q9UID6 485 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ZNF490Q9ULM2 529 aaPredicted RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 AP1M2Q9Y6Q5 423 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 COMMD3-BMI1R4GMX3 469 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 KIF26AQ9ULI4 1882 aaPredicted RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 A0A096LPI6 279 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ZBBXA8MT70 800 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 LOC730098B7Z3J9 87 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 PER2O15055 1255 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 DEAF1O75398 565 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 TIPRLO75663 272 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 PRSS23O95084 383 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 RASAL1O95294 804 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GUCA1CO95843 209 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 HPRP00739 348 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 LDLRP01130 860 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 PRNPP04156 253 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 RAP2AP10114 183 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ACRP10323 421 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GJA1P17302 382 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ITGB6P18564 788 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GGT1P19440 569 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 XPAP23025 273 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 ITGB8P26012 769 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 CTNNB1P35222 781 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 HNF4AP41235 474 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 NR1H2P55055 460 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ERVFC1P60507 584 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 RPS14P62263 151 aaKnown RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 MYBPC1Q00872 1141 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 PLOD1Q02809 727 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 LRRC74AQ0VAA2 488 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 EPS8Q12929 822 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 E2F2Q14209 437 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 MAPKAPK3Q16644 382 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 CYP51A1Q16850 503 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ZNF284Q2VY69 593 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 KCTD21Q4G0X4 260 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 RFTN2Q52LD8 501 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 FBXO48Q5FWF7 155 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 NHSL2Q5HYW2 709 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 HENMT1Q5T8I9 393 aaKnown RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 RNF220Q5VTB9 566 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GLYATQ6IB77 296 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ERAP2Q6P179 960 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 SCIMPQ6UWF3 145 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 Q6ZVU0 165 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 RGL4Q8IZJ4 473 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ADGRG2Q8IZP9 1017 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GALNT4Q8N4A0 578 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 SNX31Q8N9S9 440 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 DNAJB14Q8TBM8 379 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 SPPL3Q8TCT6 385 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 BPIFB1Q8TDL5 484 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 SLC22A17Q8WUG5 538 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 TFAP2CQ92754 450 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GTF2H4Q92759 462 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 DGCR14Q96DF8 476 aaKnown RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 CCDC97Q96F63 343 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 SAMD11Q96NU1 681 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 HHIPQ96QV1 700 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 OSBPL10Q9BXB5 764 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 ZCCHC2Q9C0B9 1178 aaKnown RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 KCNH6Q9H252 994 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 OLAHQ9NV23 265 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms