RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 AP5Z1O43299 807 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 WDPCPO95876 746 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 FAM58BPP0C7Q3 252 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SUPT20HL2P0C7V6 817 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 GNAZP19086 355 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 CD22P20273 847 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 POLR2LP62875 67 aaKnown RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 MAT1AQ00266 395 aaKnown RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 YWHAHQ04917 246 aaPredicted RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 KIR2DS3Q14952 304 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SLMAPQ14BN4 828 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 NPTX1Q15818 432 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 ASIC2Q16515 512 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SYT14P1Q58G82 188 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 LRRC73Q5JTD7 316 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 NADSYN1Q6IA69 706 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 LINC00696Q6ZRV3 163 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 EXOC3L1Q86VI1 746 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 C10orf53Q8N6V4 93 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 TRIML1Q8N9V2 468 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SMRP1Q8NCR6 262 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 GRAPLQ8TC17 118 aaPredicted RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 SECTM1Q8WVN6 248 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 UBE2Q2Q8WVN8 375 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 DNASE1L2Q92874 299 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 STAMBPL1Q96FJ0 436 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SCRN2Q96FV2 425 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 ZNF479Q96JC4 524 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 CCDC43Q96MW1 224 aaKnown RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 INTS14Q96SY0 518 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 ZPBPQ9BS86 351 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 KATNB1Q9BVA0 655 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 PRRG4Q9BZD6 226 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 ABCB8Q9NUT2 735 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SLC38A7Q9NVC3 462 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 B3GAT1Q9P2W7 334 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 MTRRQ9UBK8 725 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 DNAJB9Q9UBS3 223 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 ITGA11Q9UKX5 1188 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 LRP12Q9Y561 859 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 TRIM17Q9Y577 477 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 TAF1P21675 1872 aa4.15□□□□□ -1.74
CASC4-206ENST00000558847 TEX13DA0A0J9YY54 714 aaPredicted RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 CTAGE9A4FU28 777 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 DNM1LO00429 736 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 GAPDHSO14556 408 aaPredicted RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 IGHV4-39P01824 125 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 CSN3P07498 182 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 CTAGE8P0CG41 777 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 IRF2P14316 349 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 PRKCIP41743 596 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 RPL24P83731 157 aaKnown RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 KLC1Q07866 573 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 RRS1Q15050 365 aaKnown RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 TAF13Q15543 124 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 FUT11Q495W5 492 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ANKRD20A4Q4UJ75 823 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ANKRD20A8PQ5CZ79 823 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ZRANB3Q5FWF4 1079 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ANKRD20A2Q5SQ80 823 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ANKRD20A1Q5TYW2 823 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ANKRD20A3Q5VUR7 823 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 IYDQ6PHW0 289 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 RAD9BQ6WBX8 426 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 OTOAQ7RTW8 1153 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 NUP54Q7Z3B4 507 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 PIWIL4Q7Z3Z4 852 aaKnown RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 HOOK3Q86VS8 718 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 SNX32Q86XE0 403 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 CTAGE4Q8IX94 777 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 NDUFAF2Q8N183 169 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ARHGAP24Q8N264 748 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 CTCFLQ8NI51 663 aaPredicted RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 RAD54LQ92698 747 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 MARK4Q96L34 752 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 IL17FQ96PD4 163 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 MYADMQ96S97 322 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 POLR3CQ9BUI4 534 aaPredicted RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 FUT8Q9BYC5 575 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 MRPL9Q9BYD2 267 aaKnown RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 MTMR12Q9C0I1 747 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ARRDC1-AS1Q9H2J1 176 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 ZBTB20Q9HC78 741 aaPredicted RBP4.15□□□□□ -1.75
CASC4-206ENST00000558847 MTUS1Q9ULD2 1270 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 SLC7A7Q9UM01 511 aa4.15□□□□□ -1.75
CASC4-206ENST00000558847 IGLV5-45A0A087WSX0 123 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 TRAV24A0A0B4J272 114 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 A0A1W2PN81 502 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 PLSCR5A0PG75 271 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 C5orf52A6NGY3 159 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 YDJCA8MPS7 323 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 SLC33A1O00400 549 aaPredicted RBP4.14□□□□□ -1.75
CASC4-206ENST00000558847 RPS6KA5O75582 802 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 BAG4O95429 457 aaKnown RBP4.14□□□□□ -1.75
CASC4-206ENST00000558847 ACSL3O95573 720 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 SPP1P10451 314 aa4.14□□□□□ -1.75
CASC4-206ENST00000558847 HAPLN1P10915 354 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms