RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RNF31Q96EP0 1072 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 OXNAD1Q96HP4 312 aaPredicted RBP8.4□□□□□ -1.06
VRK1-206ENST00000557222 SGSM3Q96HU1 749 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 FER1L6-AS2Q96M78 137 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 PPP1R2P1Q96PQ5 205 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 MVB12BQ9H7P6 319 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 ACTR5Q9H9F9 607 aaPredicted RBP8.4□□□□□ -1.06
VRK1-206ENST00000557222 PCMTD2Q9NV79 361 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 KLHL8Q9P2G9 620 aaPredicted RBP8.4□□□□□ -1.06
VRK1-206ENST00000557222 AP1M2Q9Y6Q5 423 aa8.4□□□□□ -1.06
VRK1-206ENST00000557222 SLC9B1P1A6NJY1 282 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 TMEM150CB9EJG8 249 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 C9J4A7 227 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 E7EQ34 232 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 SGTAO43765 313 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 CST8O60676 142 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 ZNF189O75820 626 aaPredicted RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 SRP72O76094 671 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 IPO13O94829 963 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 PRAMEF1O95521 474 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 ALPPP05187 535 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 ESRRAP11474 423 aaPredicted RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 POLR2CP19387 275 aaPredicted RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 AGXTP21549 392 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 PRDX3P30048 256 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 CA5AP35218 305 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 PREPP48147 710 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 PRLHRP49683 370 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 GEMP55040 296 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 HADHBP55084 474 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 ITGA1P56199 1179 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 DYNLT1P63172 113 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 ABRQ12979 859 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 CHAF1BQ13112 559 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 NCF4Q15080 339 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 GPR33Q49SQ1 333 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 ZNF789Q5FWF6 425 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 TFDP3Q5H9I0 405 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 SLC6A19Q695T7 634 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 ITPRIPL1Q6GPH6 555 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 CAVIN1Q6NZI2 390 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 ZNF449Q6P9G9 518 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 SARM1Q6SZW1 724 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 RANBP10Q6VN20 620 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 LUZP1Q86V48 1076 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 CFAP206Q8IYR0 622 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 RCOR2Q8IZ40 523 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 IQCKQ8N0W5 287 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 SLC25A41Q8N5S1 370 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 OR4E2Q8NGC2 313 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 OR1L3Q8NH93 324 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 LCN9Q8WX39 176 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.39□□□□□ -1.07
VRK1-206ENST00000557222 DCUN1D1Q96GG9 259 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 RMDN2Q96LZ7 410 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 CCDC42Q96M95 316 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 FERMT1Q9BQL6 677 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 NUDT9Q9BW91 350 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 FSD1LQ9BXM9 530 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 SRMSQ9H3Y6 488 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 SOX17Q9H6I2 414 aaPredicted RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 ASB8Q9H765 288 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 VPS37BQ9H9H4 285 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 IFNKQ9P0W0 207 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 FEZ2Q9UHY8 353 aaPredicted RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 AAR2Q9Y312 384 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 CFAP20Q9Y6A4 193 aaKnown RBP8.39□□□□□ -1.07
VRK1-206ENST00000557222 ANKRD12Q6UB98 2062 aa8.39□□□□□ -1.07
VRK1-206ENST00000557222 PIKFYVEQ9Y2I7 2098 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 MEGF11A6BM72 1044 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 C2orf74A8MZ97 194 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 IFRD1O00458 451 aaPredicted RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 ZNF185O15231 689 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 SPOPO43791 374 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 KLF7O75840 302 aaPredicted RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 ZRANB2O95218 330 aaKnown RBP eCLIP8.38□□□□□ -1.07
VRK1-206ENST00000557222 CBX6O95503 412 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 CRTAMO95727 393 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 IGLV1-40P01703 118 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 ATP1B2P14415 290 aaPredicted RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 COMTP21964 271 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 PBLDP30039 288 aaPredicted RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 ADRA1AP35348 466 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 XIAPP98170 497 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 MYBPC3Q14896 1274 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 NOMO1Q15155 1222 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 EIF2S3LQ2VIR3 472 aaKnown RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 ZNF658BQ4V348 819 aaPredicted RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 LCN10Q6JVE6 187 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 RHBDD2Q6NTF9 364 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 SPOCD1Q6ZMY3 1216 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 SNX20Q7Z614 316 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 AMIGO1Q86WK6 493 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 KATNAL2Q8IYT4 538 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 GPR135Q8IZ08 494 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 SLC34A3Q8N130 599 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 NXPE1Q8N323 547 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 IPMKQ8NFU5 416 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 OR4K2Q8NGD2 314 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 PROKR1Q8TCW9 393 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms