RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GPSM1Q86YR5 675 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 PLXDC1Q8IUK5 500 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SFTPA2Q8IWL1 248 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 IQCKQ8N0W5 287 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 GOLGA6L1Q8N7Z2 621 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 OR4E2Q8NGC2 313 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 OR52E1Q8NGJ3 308 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 OR2W6PQ8NHA6 318 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 KIAA1191Q96A73 305 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SLC22A18Q96BI1 424 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 ZDHHC12Q96GR4 267 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SCYL1Q96KG9 808 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 UBXN10Q96LJ8 280 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 CCDC138Q96M89 665 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 GFM1Q96RP9 751 aaKnown RBP7.42□□□□□ -1.22
TDP1-214ENST00000556063 LRRN3Q9H3W5 708 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SYNDIG1Q9H7V2 258 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 ARL15Q9NXU5 204 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 OR6C2Q9NZP2 312 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SENP1Q9P0U3 644 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 DCDC2Q9UHG0 476 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 LGALS13Q9UHV8 139 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 RUVBL2Q9Y230 463 aaKnown RBP7.42□□□□□ -1.22
TDP1-214ENST00000556063 ENTPD2Q9Y5L3 495 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 NFS1Q9Y697 457 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 IGHV1OR21-1A0A087WYE8 117 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 SPAARA0A1B0GVQ0 90 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 PIPSLA2A3N6 862 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 OR6C74A6NCV1 312 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 NPEPPSL1A6NEC2 478 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 C2orf74A8MZ97 194 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 MYO1CO00159 1063 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 MAP3K7O43318 606 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 B4GAT1O43505 415 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 OPA1O60313 960 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 RFPL1O75677 317 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 FKBP9O95302 570 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 WISP3O95389 354 aaPredicted RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 ANXA5P08758 320 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 FTH1P19P0C7X4 201 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 PYGBP11216 843 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CD1DP15813 335 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TYRP1P17643 537 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TFEBP19484 476 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CCND1P24385 295 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CCT5P48643 541 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 HNMTP50135 292 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CCL7P80098 99 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CDKL1Q00532 357 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 ZNF844Q08AG5 666 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 KIR2DS3Q14952 304 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 NAA25Q14CX7 972 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TSNQ15631 228 aaKnown RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 PERM1Q5SV97 790 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 FBXO38Q6PIJ6 1188 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 WDR74Q6RFH5 385 aaPredicted RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 RBM44Q6ZP01 1051 aaKnown RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 USP53Q70EK8 1073 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 ZNF761Q86XN6 746 aaPredicted RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 RASGRP3Q8IV61 690 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 SYTL1Q8IYJ3 562 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TCAIMQ8N3R3 496 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 OR2L8Q8NGY9 312 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 RHEBL1Q8TAI7 183 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 KCTD4Q8WVF5 259 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 ANKRD49Q8WVL7 239 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 SMPDL3AQ92484 453 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 NCSTNQ92542 709 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 NXNL1Q96CM4 212 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 GRAMD1AQ96CP6 724 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TMEM74Q96NL1 305 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 ZIM3Q96PE6 472 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 SMC6Q96SB8 1091 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CD180Q99467 661 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 EGFL8Q99944 293 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TBC1D10AQ9BXI6 508 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 RAB33BQ9H082 229 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 IQCGQ9H095 443 aaKnown RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 PCBD2Q9H0N5 130 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 CENPHQ9H3R5 247 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 VIPAS39Q9H9C1 493 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 RDH14Q9HBH5 336 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 PCMTD2Q9NV79 361 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 HRASLS2Q9NWW9 162 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 DLL3Q9NYJ7 618 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 EURLQ9NYK6 297 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 AKAP7Q9P0M2 348 aaPredicted RBP7.41□□□□□ -1.22
TDP1-214ENST00000556063 EPHA6Q9UF33 1036 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 RNF112Q9ULX5 631 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 TMCO1Q9UM00 188 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 PDE10AQ9Y233 779 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 OARD1Q9Y530 152 aa7.41□□□□□ -1.22
TDP1-214ENST00000556063 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PRAMEF33A0A0G2JMD5 474 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 GSAPA4D1B5 854 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 OR5K3A6NET4 321 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 ISM1B1AKI9 464 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms