RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ERVPABLB-1P60509 514 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NRG1Q02297 640 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 SOX4Q06945 474 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 ITKQ08881 620 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 FCHO2Q0JRZ9 810 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SEMA3AQ14563 771 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 TRIM71Q2Q1W2 868 aaKnown RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 BCL7AQ4VC05 210 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CARD16Q5EG05 197 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SNAP47Q5SQN1 464 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 MARC1Q5VT66 337 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NEK5Q6P3R8 708 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 GCNT7Q6ZNI0 430 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 GPSM1Q86YR5 675 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SULF1Q8IWU6 871 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CARNMT1Q8N4J0 409 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 BEND7Q8N7W2 519 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 SPERTQ8NA61 448 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NETO1Q8TDF5 533 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 FAM120BQ96EK7 910 aaKnown RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 RNF170Q96K19 258 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 FCRL2Q96LA5 508 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 CEP19Q96LK0 163 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 OR2A14Q96R47 310 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CAMKK2Q96RR4 588 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 RAD9AQ99638 391 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SLC30A2Q9BRI3 323 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 IRF2BPLQ9H1B7 796 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 IL1RAPQ9NPH3 570 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 ITM2CQ9NQX7 267 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PDGFCQ9NRA1 345 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 KRT84Q9NSB2 600 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PAQR5Q9NXK6 330 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 KIF17Q9P2E2 1029 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 AASSQ9UDR5 926 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 EIF2B4Q9UI10 523 aaKnown RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 PSORS1C1Q9UIG5 152 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 IKZF3Q9UKT9 509 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.61□□□□□ -1.19
CHD8-209ENST00000555935 SNX6Q9UNH7 406 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 KCTD3Q9Y597 815 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 KLK4Q9Y5K2 254 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 COL4A4P53420 1690 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 LOC105371267A0A1B0GV96 52 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 H3BQ06 376 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 PLK4O00444 970 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 ENPP3O14638 875 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 WNT9AO14904 365 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PER2O15055 1255 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PEX10O60683 326 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CCNDBP1O95273 360 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 EGFRP00533 1210 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 FGF1P05230 155 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PGRP06401 933 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PGK2P07205 417 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CAPN1P07384 714 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 HLA-DPA1P20036 260 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CYP2A7P20853 494 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 RPS12P25398 132 aaKnown RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 PKLRP30613 574 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NUDT1P36639 197 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 GZMMP51124 257 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 RABGGTBP53611 331 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PLIN5Q00G26 463 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 DSC2Q02487 901 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 GALNT3Q14435 633 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 TBRG1Q3YBR2 411 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 FAM174BQ3ZCQ3 159 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 TIMM50Q3ZCQ8 353 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SETMARQ53H47 684 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 FBXO48Q5FWF7 155 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PRSS36Q5K4E3 855 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NXNL2Q5VZ03 156 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 LETMD1Q6P1Q0 360 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SYCE2Q6PIF2 218 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CEP68Q76N32 757 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NOXA1Q86UR1 476 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 TMEM86AQ8N2M4 240 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 ANKK1Q8NFD2 765 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 RMDN1Q96DB5 314 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 KLRG1Q96E93 195 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 PCED1BQ96HM7 432 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 SDHCQ99643 169 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 DHRS9Q9BPW9 319 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 DPY30Q9C005 99 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 AGO3Q9H9G7 860 aaKnown RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 C3orf14Q9HBI5 128 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 GOLGA2P5Q9HBQ8 144 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 RPRD1BQ9NQG5 326 aaKnown RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 RNF19AQ9NV58 838 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NDFIP2Q9NV92 336 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 NUDT4Q9NZJ9 180 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 CD274Q9NZQ7 290 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 UXTQ9UBK9 157 aaPredicted RBP7.61□□□□□ -1.19
CHD8-209ENST00000555935 TBC1D24Q9ULP9 559 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 FAM50BQ9Y247 325 aa7.61□□□□□ -1.19
CHD8-209ENST00000555935 DNAJC25-GNG10A0A024R161 153 aa7.6□□□□□ -1.19
CHD8-209ENST00000555935 UBA6A0AVT1 1052 aaPredicted RBP7.6□□□□□ -1.19
CHD8-209ENST00000555935 NCF1BA6NI72 391 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms