RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MBOAT1Q6ZNC8 495 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 CEP68Q76N32 757 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 ARMCX6Q7L4S7 300 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 EFL1Q7Z2Z2 1120 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 SPATA21Q7Z572 469 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 PIGWQ7Z7B1 504 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 CUZD1Q86UP6 607 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SPATS2Q86XZ4 545 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 NRROSQ86YC3 692 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SYT12Q8IV01 421 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 WDR75Q8IWA0 830 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 RBM12BQ8IXT5 1001 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 ABCA7Q8IZY2 2146 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 LSMEM2Q8N112 164 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 RAB42Q8N4Z0 105 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 DEFB119Q8N690 84 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 OR5AR1Q8NGP9 310 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 OR56A3Q8NH54 315 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 HMGCLL1Q8TB92 370 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 ZNF473Q8WTR7 871 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 ZFPM2Q8WW38 1151 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 MAGEB10Q96LZ2 347 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 C12orf66Q96MD2 445 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 INSM2Q96T92 566 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 PKP4Q99569 1192 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 PLCD4Q9BRC7 762 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 LRRC61Q9BV99 259 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 C20orf27Q9GZN8 174 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 FAM107BQ9H098 131 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SLC32A1Q9H598 525 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 KIR3DX1Q9H7L2 352 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 PRDM8Q9NQV8 689 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 IMP3Q9NV31 184 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 DNAJC11Q9NVH1 559 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 DNAJC28Q9NX36 388 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 STOX2Q9P2F5 926 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 SPASTQ9UBP0 616 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 VTI1BQ9UEU0 232 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 TBC1D29Q9UFV1 150 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 LNPEPQ9UIQ6 1025 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 PILRBQ9UKJ0 227 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 PSMD13Q9UNM6 376 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 WDR37Q9Y2I8 494 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 PLEKHM1Q9Y4G2 1056 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 COLEC10Q9Y6Z7 277 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SPAG17Q6Q759 2223 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 EML5Q05BV3 1969 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 E7ENX8 843 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 TNFRSF10AO00220 468 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 MATN2O00339 956 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 HRO43593 1189 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CCNT2O60583 730 aaKnown RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 UGDHO60701 494 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GPR37L1O60883 481 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ENO1P06733 434 aaKnown RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 SP9P0CG40 484 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 XRCC1P18887 633 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 AK4P27144 223 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 CTSKP43235 329 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CSNK1EP49674 416 aaKnown RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 RAB28P51157 221 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 PNLIPRP1P54315 467 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CDH13P55290 713 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 TAP2Q03519 686 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CDC16Q13042 620 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 TRAF3Q13114 568 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GRB7Q14451 532 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CLCA4Q14CN2 919 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CYP2A13Q16696 494 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 PTCHD3Q3KNS1 767 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GGTA1PQ4G0N0 100 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 PRRT3Q5FWE3 981 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 SH2D4BQ5SQS7 431 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CAPN13Q6MZZ7 669 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 CGB2Q6NT52 195 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 LAYNQ6UX15 382 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GPRIN3Q6ZVF9 776 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GOLGA7Q7Z5G4 137 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 TAF8Q7Z7C8 310 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GKN2Q86XP6 184 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 LRRC56Q8IYG6 542 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 SYTL1Q8IYJ3 562 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CLYBLQ8N0X4 340 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ZNF781Q8N8C0 355 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ANKS4BQ8N8V4 417 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CCL4L1Q8NHW4 92 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CEP76Q8TAP6 659 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 TRPC4APQ8TEL6 797 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 AGAP11Q8TF27 550 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ZNF480Q8WV37 535 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 NSUN5Q96P11 429 aaKnown RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 MIPEPQ99797 713 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CCT7Q99832 543 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ELAC2Q9BQ52 826 aaKnown RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 HGH1Q9BTY7 390 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 MENTQ9BUN1 341 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 NTMT1Q9BV86 223 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 SGPP1Q9BX95 441 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 NUSAP1Q9BXS6 441 aaKnown RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 PCBD2Q9H0N5 130 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms