RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PCDHGA8Q9Y5G5 932 aa21.83■■□□□ 1.09
BRF1-216ENST00000550208 IGHV5-51A0A0C4DH38 117 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 EFCAB7A8K855 629 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 RASGRF2O14827 1237 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 TOX3O15405 576 aaPredicted RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 TSPAN12O95859 305 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 CHRM5P08912 532 aaPredicted RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 ANKRD34CP0C6C1 535 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 JMJD7P0C870 316 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 PRDX3P30048 256 aaKnown RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 SPRP35270 261 aaPredicted RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 RAB28P51157 221 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 IL2P60568 153 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 ILF2Q12905 390 aaKnown RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 NAB1Q13506 487 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 ZNF460Q14592 562 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 LINC01555Q8NAE3 123 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 MAGEC3Q8TD91 643 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 KLHL6Q8WZ60 621 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 CYTH2Q99418 400 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 CCDC86Q9H6F5 360 aaKnown RBP21.82■■□□□ 1.08
BRF1-216ENST00000550208 ACSS3Q9H6R3 686 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 CAB39LQ9H9S4 337 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 SEMA5BQ9P283 1151 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 POMT2Q9UKY4 750 aa21.82■■□□□ 1.08
BRF1-216ENST00000550208 CEP295Q9C0D2 2601 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 PIPSLA2A3N6 862 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 C2orf74A8MZ97 194 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 CATP04040 527 aaKnown RBP21.81■■□□□ 1.08
BRF1-216ENST00000550208 RBMS1P29558 406 aaKnown RBP21.81■■□□□ 1.08
BRF1-216ENST00000550208 MAPK10P53779 464 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 POU4F1Q01851 419 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 USP10Q14694 798 aaKnown RBP21.81■■□□□ 1.08
BRF1-216ENST00000550208 UBE2R2Q712K3 238 aaPredicted RBP21.81■■□□□ 1.08
BRF1-216ENST00000550208 LSMEM2Q8N112 164 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 EIF1ADQ8N9N8 165 aaKnown RBP21.81■■□□□ 1.08
BRF1-216ENST00000550208 OR9A1PQ8NGU1 263 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 DENND1AQ8TEH3 1009 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 DLG3Q92796 817 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 CD180Q99467 661 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 PKP4Q99569 1192 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 GPR22Q99680 433 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 TXLNGYQ9BZA5 131 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 TWSG1Q9GZX9 223 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 ZNF768Q9H5H4 540 aaKnown RBP21.81■■□□□ 1.08
BRF1-216ENST00000550208 ADAMTS6Q9UKP5 1117 aa21.81■■□□□ 1.08
BRF1-216ENST00000550208 TLCD2A6NGC4 264 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 ISM1B1AKI9 464 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 MATN2O00339 956 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 ZBTB14O43829 449 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 PEBP1P30086 187 aaKnown RBP21.8■■□□□ 1.08
BRF1-216ENST00000550208 PMS2P54278 862 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 SLC12A2P55011 1212 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 LRRC8EQ6NSJ5 796 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 FAM129CQ86XR2 697 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 MYO1HQ8N1T3 1032 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 OR2L8Q8NGY9 312 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 FLVCR1-AS1Q8TAF5 88 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 UBXN4Q92575 508 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 USP7Q93009 1102 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 CNTNAP3BQ96NU0 1288 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 OR2A14Q96R47 310 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 CNTNAP3Q9BZ76 1288 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 ASCL3Q9NQ33 180 aa21.8■■□□□ 1.08
BRF1-216ENST00000550208 MYO1CO00159 1063 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 DXOO77932 396 aaKnown RBP21.79■■□□□ 1.08
BRF1-216ENST00000550208 UGT2B7P16662 529 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 CDH3P22223 829 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 MAP4P27816 1152 aaKnown RBP21.79■■□□□ 1.08
BRF1-216ENST00000550208 TNFRSF8P28908 595 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 TUBB4BP68371 445 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 IGF2-ASQ6U949 168 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 TRMT10CQ7L0Y3 403 aaKnown RBP21.79■■□□□ 1.08
BRF1-216ENST00000550208 TAX1BP1Q86VP1 789 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 BMPERQ8N8U9 685 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 FBXO15Q8NCQ5 510 aaPredicted RBP21.79■■□□□ 1.08
BRF1-216ENST00000550208 ANKRD49Q8WVL7 239 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 PDLIM5Q96HC4 596 aaKnown RBP21.79■■□□□ 1.08
BRF1-216ENST00000550208 SYTL2Q9HCH5 934 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 C1GALT1Q9NS00 363 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 SLC39A1Q9NY26 324 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.79■■□□□ 1.08
BRF1-216ENST00000550208 LNPEPQ9UIQ6 1025 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 IKZF3Q9UKT9 509 aa21.79■■□□□ 1.08
BRF1-216ENST00000550208 V9GYY5 206 aaPredicted RBP21.79■■□□□ 1.08
BRF1-216ENST00000550208 A0A087WUV0 522 aaPredicted RBP21.78■■□□□ 1.08
BRF1-216ENST00000550208 SLC9B1P1A6NJY1 282 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 B4E171 279 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 SYF2O95926 243 aaKnown RBP21.78■■□□□ 1.08
BRF1-216ENST00000550208 C8GP07360 202 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 ITGA2BP08514 1039 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 PVRP15151 417 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 ZNF37AP17032 561 aaPredicted RBP21.78■■□□□ 1.08
BRF1-216ENST00000550208 NELFEP18615 380 aaKnown RBP21.78■■□□□ 1.08
BRF1-216ENST00000550208 TSPAN7P41732 249 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 SH3BP2P78314 561 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 MC2RQ01718 297 aa21.78■■□□□ 1.08
BRF1-216ENST00000550208 FASTKQ14296 549 aaKnown RBP21.78■■□□□ 1.08
BRF1-216ENST00000550208 KIR2DS3Q14952 304 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms