RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RUNDC3AQ59EK9 446 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 MFSD14CQ5VZR4 134 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CAPN13Q6MZZ7 669 aaPredicted RBP13.44□□□□□ -0.26
HDAC7-228ENST00000548938 SHQ1Q6PI26 577 aaKnown RBP13.44□□□□□ -0.26
HDAC7-228ENST00000548938 MIB1Q86YT6 1006 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 SLC22A15Q8IZD6 547 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 OR52E4Q8NGH9 312 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 RMDN1Q96DB5 314 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 TXNDC15Q96J42 360 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 EXOC2Q96KP1 924 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 RPRD1AQ96P16 312 aaPredicted RBP13.44□□□□□ -0.26
HDAC7-228ENST00000548938 MAGIXQ9H6Y5 334 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 PRDM8Q9NQV8 689 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 SCN3BQ9NY72 215 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 RGS10O43665 173 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 PRAMEF11O60813 436 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 FAM20BO75063 409 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 SPNP16150 400 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 EPHA2P29317 976 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 OR1E1P30953 314 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GPR15P49685 360 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 DAPP51397 102 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 TSPY1Q01534 308 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 IFITM2Q01629 132 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GTF2H2Q13888 395 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GTF2H3Q13889 308 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 LRIT3Q3SXY7 679 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 STEAP3Q658P3 488 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GTF2H2CQ6P1K8 395 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 CLIP4Q8N3C7 705 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 LIX1Q8N485 282 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 POC5Q8NA72 575 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 DPY30Q9C005 99 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 MIR1-1HGQ9H1L0 117 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 SP140LQ9H930 580 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-228ENST00000548938 ZBTB20Q9HC78 741 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-228ENST00000548938 FARSBQ9NSD9 589 aaKnown RBP13.43□□□□□ -0.26
HDAC7-228ENST00000548938 NUDT4Q9NZJ9 180 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 FKBPLQ9UIM3 349 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 ABCG2Q9UNQ0 655 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GMPPBQ9Y5P6 360 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 COMMD10Q9Y6G5 202 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 EFCAB9A8MZ26 197 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 FAM47E-STBD1D6RA91 191 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 GPR182O15218 404 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 NUAK1O60285 661 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 TSPAN3O60637 253 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 DLGAP3O95886 979 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 NTRK1P04629 796 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 ITGB6P18564 788 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 MAGP20916 626 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 KRT20P35900 424 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 RGRP47804 291 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 LACC1Q8IV20 430 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 ZDHHC21Q8IVQ6 265 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 SVOPQ8N4V2 548 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 B3GALT6Q96L58 329 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 PPP3R2Q96LZ3 170 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 HOXD1Q9GZZ0 328 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 DCSTAMPQ9H295 470 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 IPPKQ9H8X2 491 aa13.43□□□□□ -0.26
HDAC7-228ENST00000548938 ABI2Q9NYB9 513 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-228ENST00000548938 TRBV5-3A0A0A0MS03 114 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 A0A0U1RQS6 177 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 E5RI56 91 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 SNPHO15079 494 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 B3GALT4O96024 378 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 GSNP06396 782 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 CTSHP09668 335 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 MYCLP1P12525 358 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-228ENST00000548938 MC4RP32245 332 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 PTPRRQ15256 657 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 PARP15Q460N3 678 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 NEK10Q6ZWH5 1172 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 FAM83FQ8NEG4 500 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-228ENST00000548938 CAPSLQ8WWF8 208 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 UBE2FQ969M7 185 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 FAM120BQ96EK7 910 aaKnown RBP13.42□□□□□ -0.26
HDAC7-228ENST00000548938 PYURFQ96I23 114 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 OR52E6Q96RD3 313 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 BPIFA1Q9NP55 256 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 RASSF1Q9NS23 344 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 C1orf109Q9NX04 203 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 OPTCQ9UBM4 332 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 EIF3LQ9Y262 564 aaKnown RBP13.42□□□□□ -0.26
HDAC7-228ENST00000548938 FAM220BPB1ANY3 271 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 AREL1O15033 823 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 RFPL2O75678 378 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 DIRAS1O95057 198 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 EIF2S1P05198 315 aaKnown RBP13.42□□□□□ -0.26
HDAC7-228ENST00000548938 BMPR1AP36894 532 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 HSPA7P48741 367 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 DDR2Q16832 855 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 SYT16Q17RD7 645 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
HDAC7-228ENST00000548938 SUSD1Q6UWL2 747 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 AHSA2Q719I0 299 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 MILR1Q7Z6M3 343 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms