RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 OR4K2Q8NGD2 314 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 OR1N1Q8NGS0 311 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.14□□□□□ -0.15
RTN3-214ENST00000545432 DLG3Q92796 817 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 ULK4Q96C45 1275 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 THOC3Q96J01 351 aaKnown RBP14.14□□□□□ -0.15
RTN3-214ENST00000545432 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 SPHK1Q9NYA1 384 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 EURLQ9NYK6 297 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 ABI3Q9P2A4 366 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 CTTNBP2NLQ9P2B4 639 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 FAM8A1Q9UBU6 413 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 CDC23Q9UJX2 597 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 NXT1Q9UKK6 140 aaKnown RBP14.14□□□□□ -0.15
RTN3-214ENST00000545432 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 TACC2O95359 2948 aa14.14□□□□□ -0.15
RTN3-214ENST00000545432 ABCA2Q9BZC7 2435 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 TRAV17A0A0B4J275 112 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 C2orf81A6NN90 581 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 CHRM5P08912 532 aaPredicted RBP14.13□□□□□ -0.15
RTN3-214ENST00000545432 H2AFZP0C0S5 128 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 ADRA1AP35348 466 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 PBX1P40424 430 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 TNFSF10P50591 281 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 KRTAP10-9P60411 292 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 PRKG2Q13237 762 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 FILIP1LQ4L180 1135 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 VWA2Q5GFL6 755 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 YOD1Q5VVQ6 348 aaPredicted RBP14.13□□□□□ -0.15
RTN3-214ENST00000545432 ATG9BQ674R7 924 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 GFRALQ6UXV0 394 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 H2AFVQ71UI9 128 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 BZW1Q7L1Q6 419 aaKnown RBP14.13□□□□□ -0.15
RTN3-214ENST00000545432 ZNF567Q8N184 647 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 DNAJB8Q8NHS0 232 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 DCUN1D1Q96GG9 259 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 VPS50Q96JG6 964 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 COPS8Q99627 209 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 TREX2Q9BQ50 279 aaPredicted RBP14.13□□□□□ -0.15
RTN3-214ENST00000545432 BPIFA3Q9BQP9 254 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 MAK16Q9BXY0 300 aaKnown RBP14.13□□□□□ -0.15
RTN3-214ENST00000545432 IL1RAPL1Q9NZN1 696 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 FKBPLQ9UIM3 349 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 ITGB1BP2Q9UKP3 347 aa14.13□□□□□ -0.15
RTN3-214ENST00000545432 NCOA6Q14686 2063 aaPredicted RBP14.13□□□□□ -0.15
RTN3-214ENST00000545432 SPG11Q96JI7 2443 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 FITM1A5D6W6 292 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 CCL21O00585 134 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 DSCR3O14972 297 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 KCNN4O15554 427 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 HPP00738 406 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 PEBP1P30086 187 aaKnown RBP14.12□□□□□ -0.15
RTN3-214ENST00000545432 ADORA2A-AS1P86434 159 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 KIR2DS3Q14952 304 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 GPR33Q49SQ1 333 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 LINC00696Q6ZRV3 163 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 SNX20Q7Z614 316 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 HOOK3Q86VS8 718 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 MCATQ8IVS2 390 aaKnown RBP14.12□□□□□ -0.15
RTN3-214ENST00000545432 TBC1D21Q8IYX1 336 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 TFB1MQ8WVM0 346 aaKnown RBP14.12□□□□□ -0.15
RTN3-214ENST00000545432 SPOCK3Q9BQ16 436 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 GORASP1Q9BQQ3 440 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 HGH1Q9BTY7 390 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 ZDHHC3Q9NYG2 299 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 POLG2Q9UHN1 485 aa14.12□□□□□ -0.15
RTN3-214ENST00000545432 DNHD1Q96M86 4753 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 TRGV8A0A0C4DH27 118 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 CFAP99D6REC4 459 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 AGTP01019 485 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 ALAS2P22557 587 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 FDXRP22570 491 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 MST1P26927 711 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 KIR3DL1P43629 444 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 ZBED6P86452 979 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 TMEM207Q6UWW9 146 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 TTLL10Q6ZVT0 673 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 PID1Q7Z2X4 250 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 IPMKQ8NFU5 416 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 OR5AR1Q8NGP9 310 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 RNF32Q9H0A6 362 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 ENKD1Q9H0I2 346 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 VPS37BQ9H9H4 285 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 LUC7LQ9NQ29 371 aaKnown RBP14.11□□□□□ -0.15
RTN3-214ENST00000545432 SAE1Q9UBE0 346 aaPredicted RBP14.11□□□□□ -0.15
RTN3-214ENST00000545432 CRLS1Q9UJA2 301 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 TRHDEQ9UKU6 1024 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 ZNF835Q9Y2P0 537 aa14.11□□□□□ -0.15
RTN3-214ENST00000545432 IGLV3-12A0A075B6K2 115 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 H7C0S8 307 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 C19orf84I3L1E1 186 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 USP1O94782 785 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 AP2A1O95782 977 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 SNRPB2P08579 225 aaKnown RBP14.1□□□□□ -0.15
RTN3-214ENST00000545432 ARHGAP25P42331 645 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 CDKN2BP42772 138 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 TNNT3P45378 269 aaPredicted RBP14.1□□□□□ -0.15
RTN3-214ENST00000545432 CARSP49589 748 aaKnown RBP14.1□□□□□ -0.15
RTN3-214ENST00000545432 ZNF140P52738 457 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms