RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 GLT6D1Q7Z4J2 308 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 HOOK3Q86VS8 718 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 CPLX3Q8WVH0 158 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 C8orf44Q96CB5 159 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 OXNAD1Q96HP4 312 aaPredicted RBP9.01□□□□□ -0.97
CHD4-212ENST00000545083 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 ZNF830Q96NB3 372 aaPredicted RBP9.01□□□□□ -0.97
CHD4-212ENST00000545083 OLFM3Q96PB7 478 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 TMEM121Q9BTD3 319 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 NUP62CLQ9H1M0 184 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 MVB12BQ9H7P6 319 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 MRM3Q9HC36 420 aaKnown RBP9.01□□□□□ -0.97
CHD4-212ENST00000545083 EURLQ9NYK6 297 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.01□□□□□ -0.97
CHD4-212ENST00000545083 AIPL1Q9NZN9 384 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 PTGFRNQ9P2B2 879 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 KLHL20Q9Y2M5 609 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
CHD4-212ENST00000545083 VPS13CQ709C8 3753 aa9□□□□□ -0.97
CHD4-212ENST00000545083 ABCA4P78363 2273 aa9□□□□□ -0.97
CHD4-212ENST00000545083 A0A0A6YYK5 440 aaPredicted RBP9□□□□□ -0.97
CHD4-212ENST00000545083 A0A0J9YY10 115 aa9□□□□□ -0.97
CHD4-212ENST00000545083 C17orf113A0A1B0GUU1 675 aa9□□□□□ -0.97
CHD4-212ENST00000545083 DYTNA2CJ06 578 aa9□□□□□ -0.97
CHD4-212ENST00000545083 VSTM2BA6NLU5 285 aa9□□□□□ -0.97
CHD4-212ENST00000545083 MYO1FO00160 1098 aa9□□□□□ -0.97
CHD4-212ENST00000545083 HPP00738 406 aa9□□□□□ -0.97
CHD4-212ENST00000545083 CELA2AP08217 269 aa9□□□□□ -0.97
CHD4-212ENST00000545083 CHRM5P08912 532 aaPredicted RBP9□□□□□ -0.97
CHD4-212ENST00000545083 PYGMP11217 842 aa9□□□□□ -0.97
CHD4-212ENST00000545083 CD99P14209 185 aa9□□□□□ -0.97
CHD4-212ENST00000545083 NFKB1P19838 968 aa9□□□□□ -0.97
CHD4-212ENST00000545083 KDELR1P24390 212 aa9□□□□□ -0.97
CHD4-212ENST00000545083 MCM3P25205 808 aa9□□□□□ -0.97
CHD4-212ENST00000545083 PTPN3P26045 913 aa9□□□□□ -0.97
CHD4-212ENST00000545083 PEBP1P30086 187 aaKnown RBP9□□□□□ -0.97
CHD4-212ENST00000545083 SMSP52788 366 aa9□□□□□ -0.97
CHD4-212ENST00000545083 XIAPP98170 497 aa9□□□□□ -0.97
CHD4-212ENST00000545083 TEX44Q53QW1 395 aa9□□□□□ -0.97
CHD4-212ENST00000545083 SLC9A4Q6AI14 798 aa9□□□□□ -0.97
CHD4-212ENST00000545083 FAAH2Q6GMR7 532 aa9□□□□□ -0.97
CHD4-212ENST00000545083 MAP7D3Q8IWC1 876 aa9□□□□□ -0.97
CHD4-212ENST00000545083 METTL27Q8N6F8 245 aaPredicted RBP9□□□□□ -0.97
CHD4-212ENST00000545083 SIRT6Q8N6T7 355 aa9□□□□□ -0.97
CHD4-212ENST00000545083 ANKRD20A12PQ8NF67 263 aa9□□□□□ -0.97
CHD4-212ENST00000545083 OR5AR1Q8NGP9 310 aa9□□□□□ -0.97
CHD4-212ENST00000545083 BRIX1Q8TDN6 353 aaKnown RBP9□□□□□ -0.97
CHD4-212ENST00000545083 TFGQ92734 400 aaPredicted RBP9□□□□□ -0.97
CHD4-212ENST00000545083 HAS2Q92819 552 aa9□□□□□ -0.97
CHD4-212ENST00000545083 TEKT5Q96M29 485 aa9□□□□□ -0.97
CHD4-212ENST00000545083 TREX2Q9BQ50 279 aaPredicted RBP9□□□□□ -0.97
CHD4-212ENST00000545083 ASB8Q9H765 288 aa9□□□□□ -0.97
CHD4-212ENST00000545083 FAM153AQ9UHL3 310 aa9□□□□□ -0.97
CHD4-212ENST00000545083 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
CHD4-212ENST00000545083 PLCL2Q9UPR0 1127 aa9□□□□□ -0.97
CHD4-212ENST00000545083 PKP3Q9Y446 797 aa9□□□□□ -0.97
CHD4-212ENST00000545083 ARL5AQ9Y689 179 aa9□□□□□ -0.97
CHD4-212ENST00000545083 AKAP6Q13023 2319 aa9□□□□□ -0.97
CHD4-212ENST00000545083 AGAP14A8MT82 685 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 IFRD1O00458 451 aaPredicted RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 DSCR3O14972 297 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 STX7O15400 261 aaKnown RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 ZNHIT1O43257 154 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 SRP72O76094 671 aaKnown RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 USP1O94782 785 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 PROSCO94903 275 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 RASAL1O95294 804 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 WDPCPO95876 746 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 CRYABP02511 175 aaKnown RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 PRR35P0CG20 571 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 ESRRAP11474 423 aaPredicted RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 ACPPP15309 386 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 OR1D4P47884 311 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 CD151P48509 253 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 RBPJQ06330 500 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 KLC1Q07866 573 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 PDK1Q15118 436 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 SLC1A5Q15758 541 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 MEX3BQ6ZN04 569 aaKnown RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 KBTBD2Q8IY47 623 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 PRSS58Q8IYP2 241 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 LMNTD1Q8N9Z9 388 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 DNAJB8Q8NHS0 232 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 NRGNQ92686 78 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 DLG3Q92796 817 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 CRB3Q9BUF7 120 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD4-212ENST00000545083 GSX1Q9H4S2 264 aaPredicted RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 FAM96AQ9H5X1 160 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 CUTCQ9NTM9 273 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 HACD3Q9P035 362 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 NXT1Q9UKK6 140 aaKnown RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 PLAGL1Q9UM63 463 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 ZNF835Q9Y2P0 537 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 MEMO1Q9Y316 297 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 PCDHGB6Q9Y5F9 930 aa8.99□□□□□ -0.97
CHD4-212ENST00000545083 FLNAP21333 2647 aaKnown RBP8.99□□□□□ -0.97
CHD4-212ENST00000545083 C3orf70A6NLC5 250 aaPredicted RBP8.98□□□□□ -0.97
CHD4-212ENST00000545083 MAP2K7O14733 419 aa8.98□□□□□ -0.97
CHD4-212ENST00000545083 MED26O95402 600 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms