RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TLCD2A6NGC4 264 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SLC9B1P1A6NJY1 282 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 A8MX80 341 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 GPR89AB7ZAQ6 455 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 C19orf84I3L1E1 186 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 HRKO00198 91 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 TRAFD1O14545 582 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 KIF1CO43896 1103 aaKnown RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 VEGFDO43915 354 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SOCS5O75159 536 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 PALMO75781 387 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 MTA2O94776 668 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZBTB11O95625 1053 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CRYABP02511 175 aaKnown RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 EBLN1P0CF75 366 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 GPR89BP0CG08 455 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 MYBL2P10244 700 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ACP5P13686 325 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF30P17039 623 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SYT1P21579 422 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 LSP1P33241 339 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CA5AP35218 305 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ADRA1BP35368 520 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 RORAP35398 523 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 KRT9P35527 623 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 FOLR3P41439 243 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ME1P48163 572 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 TDGF1P3P51864 188 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 IST1P53990 364 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CSNK1G2P78368 415 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 LRRC63Q05C16 580 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ITKQ08881 620 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 Q0VFX4 171 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 FOXD4Q12950 439 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 RFTN1Q14699 578 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CYP2A13Q16696 494 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 PTPN20Q4JDL3 420 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 PLEKHS1Q5SXH7 462 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CATSPEREQ5SY80 951 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZFYVE27Q5T4F4 411 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CES4AQ5XG92 561 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 DENND2CQ68D51 928 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF324BQ6AW86 544 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 DUS1LQ6P1R4 473 aaKnown RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 FAM198BQ6UWH4 519 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 TRIM72Q6ZMU5 477 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SPOCD1Q6ZMY3 1216 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 MEX3BQ6ZN04 569 aaKnown RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 USP45Q70EL2 814 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ARCQ7LC44 396 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 BNIPLQ7Z465 357 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 TMEM200AQ86VY9 491 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SYTL1Q8IYJ3 562 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 D2HGDHQ8N465 521 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 AOPEPQ8N6M6 819 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 RTL3Q8N8U3 475 aaKnown RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF610Q8N9Z0 462 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ACBD4Q8NC06 268 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CLRN3Q8NCR9 226 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 FNIP1Q8TF40 1166 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SHC3Q92529 594 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 RSC1A1Q92681 617 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF501Q96CX3 271 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CXorf40BQ96DE9 158 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 COX14Q96I36 57 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 C16orf92Q96LL3 132 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 PLEKHG4BQ96PX9 1271 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 TREX2Q9BQ50 279 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 CARD9Q9H257 536 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 OSGEPL1Q9H4B0 414 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 ZMAT4Q9H898 229 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 RIC8BQ9NVN3 520 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 SEC14L3Q9UDX4 400 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 DNPEPQ9ULA0 475 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 KCNK6Q9Y257 313 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 RPH3AQ9Y2J0 694 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-220ENST00000544550 TMEM98Q9Y2Y6 226 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 POLQO75417 2590 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 HIVEP1P15822 2718 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 TRAV17A0A0B4J275 112 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ARHGAP42A6NI28 874 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PDZK1P1A8MUH7 402 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 AGPSO00116 658 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 BIN1O00499 593 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 HTRA2O43464 458 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 LDB2O43679 373 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 NUAK1O60285 661 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PRAMEF11O60813 436 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 UNC5CO95185 931 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 MLYCDO95822 493 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 SOD1P00441 154 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 HEXAP06865 529 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 FAHP16930 419 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 CYP2A7P20853 494 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 LHCGRP22888 699 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PTX3P26022 381 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 EPHB2P29323 1055 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ADSLP30566 484 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 HTR7P34969 479 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 HSPA9P38646 679 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms