RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 C14orf80Q86SX3 495 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 COX18Q8N8Q8 333 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 RAB26Q9ULW5 256 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 RBM7Q9Y580 266 aaKnown RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 A0A0D9SEW6 157 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 A0A1W2PRB8 838 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 CCNB2O95067 398 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 CTSOP43234 321 aaPredicted RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 OLR1P78380 273 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 ACSBG2Q5FVE4 666 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 PEX5LQ8IYB4 626 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 GPR151Q8TDV0 419 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 TEPSINQ96N21 525 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 GADD45GO95257 159 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 ALOX5P09917 674 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 IFI44LQ53G44 452 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 SLC8B1Q6J4K2 584 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 GPR153Q6NV75 609 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 TMPRSS11AQ6ZMR5 421 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 TMEM175Q9BSA9 504 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 EBF2Q9HAK2 575 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 ZCCHC3Q9NUD5 404 aaKnown RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 FAM234BA2RU67 622 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 B3GALT2O43825 422 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 HLA-EP13747 358 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 TYRP14679 529 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 BDKRB1P46663 353 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 NCBP2P52298 156 aaKnown RBP eCLIP12.55□□□□□ -0.44e-7■■□□□ 13.1
CHD4-211ENST00000544484 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 MXD1Q05195 221 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 PPP1R8Q12972 351 aaKnown RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 PAFAH1B3Q15102 231 aaKnown RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 TMC8Q8IU68 726 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 NAT14Q8WUY8 206 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 MIPEPQ99797 713 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 PCBD2Q9H0N5 130 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 SLC35C2Q9NQQ7 365 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 UBE2QL1A1L167 161 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 LDB2O43679 373 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 TULP3O75386 442 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 ALDH4A1P30038 563 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 SEPHS1P49903 392 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 PNLIPRP1P54315 467 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 LRRC66Q68CR7 880 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 GLB1L3Q8NCI6 653 aaPredicted RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 ZNF461Q8TAF7 563 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 SNX33Q8WV41 574 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 ZBED6CLQ96FA7 236 aaPredicted RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 EBF3Q9H4W6 596 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 TMLHEQ9NVH6 421 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 MYO9BQ13459 2157 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 INPPL1O15357 1258 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 BNC1Q01954 994 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 SLC30A6Q6NXT4 461 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 GPR88Q9GZN0 384 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 VPS29Q9UBQ0 182 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 INSL5Q9Y5Q6 135 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 RIIAD1A6NNX1 92 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 TCEA3O75764 348 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 FGF18O76093 207 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 HOXB6P17509 224 aaKnown RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 PPP2R2BQ00005 443 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 GALNT2Q10471 571 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 ZNF846Q147U1 533 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 GHDCQ8N2G8 530 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 PIGXQ8TBF5 258 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 S100ZQ8WXG8 99 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 ZNF514Q96K75 400 aaPredicted RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 AMBNQ9NP70 447 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 B4DGG1 531 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 AVPR1BP47901 424 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 CCT3P49368 545 aaKnown RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 PIGKQ92643 395 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 A0A0J9YVX5 310 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 PIRO00625 290 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 DNAJA2O60884 412 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 OPN1SWP03999 348 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 TCEAL5Q5H9L2 206 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 UBAP2Q5T6F2 1119 aaKnown RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 IKBIPQ70UQ0 350 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 IGDCC3Q8IVU1 814 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 HTRA1Q92743 480 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 SLC7A8Q9UHI5 535 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 ATP1B2P14415 290 aaPredicted RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 CKMT2P17540 419 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 CCNFP41002 786 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 OR4F3Q6IEY1 312 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 AHI1Q8N157 1196 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 C1orf52Q8N6N3 182 aaKnown RBP12.54□□□□□ -0.4
CHD4-211ENST00000544484 GPER1Q99527 375 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms