RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 ADH1BP00325 375 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MPC1LP0DKB6 136 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 AOC1P19801 751 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 UGT1A1P22309 533 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 AVPR1BP47901 424 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TMBIM6P55061 237 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GNA12Q03113 381 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SCRN3Q0VDG4 424 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 RALGDSQ12967 914 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SLC1A5Q15758 541 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CCL14Q16627 93 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 NPNTQ6UXI9 565 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ABHD13Q7L211 337 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TIGD4Q8IY51 512 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CPT1BQ92523 772 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SLC22A18Q96BI1 424 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ITPAQ9BY32 194 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MED28Q9H204 178 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 NOCTQ9UK39 431 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM5Q9Y2B1 443 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 REXO2Q9Y3B8 237 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 NOX1Q9Y5S8 564 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM221A6NGB7 291 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 M0R296 226 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PLOD2O00469 737 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PLGP00747 810 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 IQCF3P0C7M6 154 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CD247P20963 164 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CD72P21854 359 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 KLRK1P26718 216 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MBTD1Q05BQ5 628 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MBOAT1Q6ZNC8 495 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SNX20Q7Z614 316 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 C17orf50Q8WW18 174 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GEMIN6Q8WXD5 167 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 P2RY11Q96G91 374 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 LRRC3Q9BY71 257 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM59LQ9UK28 342 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TCRBV21S2A2A0A5A6 115 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CXCR6O00574 342 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PSIP1O75475 530 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 H6PDO95479 791 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GRIA1P42261 906 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 HNRNPKP61978 463 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SIM1P81133 766 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GRIK2Q13002 908 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 DLG2Q15700 870 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ZBTB6Q15916 424 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 KCTD19Q17RG1 926 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ALFQ53S48 1182 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 DNM1P34Q6PK57 102 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 FRMD7Q6ZUT3 714 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF527Q8NB42 609 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GOT1L1Q8NHS2 421 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 FRS2Q8WU20 508 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SMARCD2Q92925 531 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM209Q96SK2 561 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 NDNQ99608 321 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 USB1Q9BQ65 265 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 NTPCRQ9BSD7 190 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 EBF2Q9HAK2 575 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 RC3H2Q9HBD1 1191 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 OXSMQ9NWU1 459 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GDE1Q9NZC3 331 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PDP1Q9P0J1 537 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CNOT6Q9ULM6 557 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GTF2A1LQ9UNN4 478 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF879B4DU55 563 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 OR10H2O60403 315 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 RSL1D1O76021 490 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 DCKP27707 260 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CBX5P45973 191 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ARCN1P48444 511 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MNX1P50219 401 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ECT2LQ008S8 904 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SLC18A2Q05940 514 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MLF2Q15773 248 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 EARS2Q5JPH6 523 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TCEAL6Q6IPX3 200 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CYP2R1Q6VVX0 501 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 HEATR4Q86WZ0 1026 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 OR10H5Q8NGA6 315 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ELAC1Q9H777 363 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 DDX18Q9NVP1 670 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TAS2R14Q9NYV8 317 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 LRRC42Q9Y546 428 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SCN11AQ9UI33 1791 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PKD1L3Q7Z443 1732 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MAGEB17A8MXT2 336 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 INSIG1O15503 277 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TPD52L2O43399 206 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 POP4O95707 220 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 OXSR1O95747 527 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 SOD2P04179 222 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 CYP11A1P05108 521 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 FGFR3P22607 806 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 BDNFP23560 247 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 TAS2R40P59535 323 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PUDPQ08623 228 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 AMZ1Q400G9 498 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms