RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SARS2Q9NP81 518 aaKnown RBP13.43□□□□□ -0.26
VPS33A-208ENST00000543633 ANGPTL3Q9Y5C1 460 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 ZFP37Q9Y6Q3 630 aaPredicted RBP13.43□□□□□ -0.26
VPS33A-208ENST00000543633 PLXNA4Q9HCM2 1894 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 SCN8AQ9UQD0 1980 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 ANKRD12Q6UB98 2062 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 NPIPB8E9PQR5 432 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 M0R3G1 203 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 MANBAO00462 879 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TAPBPO15533 448 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ULK1O75385 1050 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 JRKO75564 520 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 SERPINA1P01009 418 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 EIF2S1P05198 315 aaKnown RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 RHOCP08134 193 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 PRPS2P11908 318 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 DGKAP23743 735 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 HTRA3P83110 453 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 FADDQ13158 208 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 PTGR1Q14914 329 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 USP39Q53GS9 565 aaKnown RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 LYPLAL1Q5VWZ2 237 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 CPZQ66K79 652 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TMEM179BQ7Z7N9 219 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 P2RY8Q86VZ1 359 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 HS3ST5Q8IZT8 346 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TTC9BQ8N6N2 239 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ATAD1Q8NBU5 361 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 DYNC2LI1Q8TCX1 351 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ABHD8Q96I13 439 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 OR52E6Q96RD3 313 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF300Q96RE9 604 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 APOL4Q9BPW4 351 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TM9SF3Q9HD45 589 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 DGKBQ9Y6T7 804 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 THSD7BQ9C0I4 1608 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 A0A1B0GVM2 712 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 CCNDBP1O95273 360 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TGM1P22735 817 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 PRPH2P23942 346 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 HMGCLP35914 325 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 HSPA7P48741 367 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 CLDN8P56748 225 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 IL5RAQ01344 420 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 VAC14Q08AM6 782 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 LAPTM5Q13571 262 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 RAPSNQ13702 412 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 MFSD14CQ5VZR4 134 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 PTRHD1Q6GMV3 140 aaKnown RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 NCEH1Q6PIU2 408 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 SNX20Q7Z614 316 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF280BQ86YH2 543 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 RBFAQ8N0V3 343 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 CFAP52Q8N1V2 620 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 EFHBQ8N7U6 833 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 OR6Q1Q8NGQ2 317 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 IPCEF1Q8WWN9 437 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 TESCQ96BS2 214 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 PLD4Q96BZ4 506 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 NSUN3Q9H649 340 aaKnown RBP13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ATP13A3Q9H7F0 1226 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 CCSER2Q9H7U1 834 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ELOVL2Q9NXB9 296 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 WWOXQ9NZC7 414 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 PCDHGA10Q9Y5H3 936 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 ACTL7AQ9Y615 435 aa13.42□□□□□ -0.26
VPS33A-208ENST00000543633 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 FZD6O60353 706 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 DPM1O60762 260 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 XYLBO75191 536 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KRT6AP02538 564 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KRT6BP04259 564 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 MAPK1P28482 360 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KRT6CP48668 564 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 ST13P50502 369 aaKnown RBP13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KCNQ1P51787 676 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 CSNK2BP67870 215 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 C18orf21Q32NC0 220 aaPredicted RBP13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KDM4DQ6B0I6 523 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 GCNT7Q6ZNI0 430 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 B3GNT8Q7Z7M8 397 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 LACC1Q8IV20 430 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 ZDHHC21Q8IVQ6 265 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 OVCA2Q8WZ82 227 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 FCGR1BQ92637 280 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 EXOC2Q96KP1 924 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 HBEGFQ99075 208 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 CCDC90BQ9GZT6 254 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 TNKS2Q9H2K2 1166 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 ARMC7Q9H6L4 198 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 KLQ9UEF7 1012 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF490Q9ULM2 529 aaPredicted RBP13.41□□□□□ -0.26
VPS33A-208ENST00000543633 PCDHGC4Q9Y5F7 938 aa13.41□□□□□ -0.26
VPS33A-208ENST00000543633 AP1M2Q9Y6Q5 423 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms