RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 AP3M1Q9Y2T2 418 aa12.28□□□□□ -0.44
SMCR5-201ENST00000543475 CENPBD1B2RD01 187 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 SMPD1P17405 629 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 GADD45AP24522 165 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 EPHA2P29317 976 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 CTSKP43235 329 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 AFF1P51825 1210 aaKnown RBP12.27□□□□□ -0.44
SMCR5-201ENST00000543475 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.44
SMCR5-201ENST00000543475 ATG9BQ674R7 924 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 OR2T5Q6IEZ7 315 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 SPATC1Q76KD6 591 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 GOLGA7Q7Z5G4 137 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 KRTCAP2Q8N6L1 136 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 OR4K2Q8NGD2 314 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 OR2T29Q8NH02 315 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 C1orf74Q96LT6 269 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 RTP3Q9BQQ7 232 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 RNF38Q9H0F5 515 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 GABARAPL1Q9H0R8 117 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 TSR3Q9UJK0 312 aaKnown RBP12.27□□□□□ -0.44
SMCR5-201ENST00000543475 NDRG4Q9ULP0 352 aaKnown RBP12.27□□□□□ -0.44
SMCR5-201ENST00000543475 N6AMT1Q9Y5N5 214 aa12.27□□□□□ -0.44
SMCR5-201ENST00000543475 COL4A4P53420 1690 aaPredicted RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 CASTOR2A6NHX0 329 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 FAM220BPB1ANY3 271 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 THP07101 528 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 MYCLP1P12525 358 aaPredicted RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 CDKN1CP49918 316 aaPredicted RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 PRKCDQ05655 676 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 ZNF235Q14590 738 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 KIAA1614Q5VZ46 1190 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 AFTPHQ6ULP2 937 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 SNX20Q7Z614 316 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 LIX1Q8N485 282 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 GLB1L3Q8NCI6 653 aaPredicted RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 CHAC2Q8WUX2 184 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 FCGR1BQ92637 280 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 TP53INP1Q96A56 240 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 CDK5RAP1Q96SZ6 601 aaKnown RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 KRT84Q9NSB2 600 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 SLC6A13Q9NSD5 602 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 PDP1Q9P0J1 537 aaPredicted RBP12.27□□□□□ -0.45
SMCR5-201ENST00000543475 ABCG2Q9UNQ0 655 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 KCNH4Q9UQ05 1017 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 PCDHGA3Q9Y5H0 932 aa12.27□□□□□ -0.45
SMCR5-201ENST00000543475 LOC100506127A0A0U1RQW1 187 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 NOTOA8MTQ0 251 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 OR7A17O14581 309 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PKMP14618 531 aaKnown RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 IL1RNP18510 177 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 EFNA1P20827 205 aaPredicted RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 CXCR2P25025 360 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PBX3P40426 434 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 GTF2H2Q13888 395 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PAN2Q504Q3 1202 aaKnown RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 GTF2H2CQ6P1K8 395 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 MILR1Q7Z6M3 343 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 SCD5Q86SK9 330 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 ATG16L2Q8NAA4 619 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 IL17RDQ8NFM7 739 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 POP5Q969H6 163 aaKnown RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PDLIM5Q96HC4 596 aaKnown RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 SERPINB11Q96P15 392 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 COPS4Q9BT78 406 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 NLE1Q9NVX2 485 aaPredicted RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 TMEM248Q9NWD8 314 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 FNDC3AQ9Y2H6 1198 aaKnown RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 A3GALT2U3KPV4 340 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 E5RI56 91 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PER2O15055 1255 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 HOXC11O43248 304 aaPredicted RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 ZW10O43264 779 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 RGS14O43566 566 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 OR1I1O60431 355 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 DIRAS1O95057 198 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 OTCP00480 354 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PIK3CGP48736 1102 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 OR2B6P58173 313 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 MAD2L1Q13257 205 aaPredicted RBP12.26□□□□□ -0.45
SMCR5-201ENST00000543475 DDR2Q16832 855 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 TIGD6Q17RP2 521 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PRSS36Q5K4E3 855 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 CACHD1Q5VU97 1274 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 ZNF544Q6NX49 715 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 FAM171BQ6P995 826 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 HORMAD1Q86X24 394 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 P3H2Q8IVL5 708 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 C10orf111Q8N326 155 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 ACBD6Q9BR61 282 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PAAF1Q9BRP4 392 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 CDADC1Q9BWV3 514 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 NUAK2Q9H093 628 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 IPPKQ9H8X2 491 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 NMUR1Q9HB89 426 aa12.26□□□□□ -0.45
SMCR5-201ENST00000543475 PRDM5Q9NQX1 630 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms