RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848	KDM1A	O60341	852 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	METTL18	O95568	372 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	CHRM5	P08912	532 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PRSS56	P0CW18	603 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	FOLR3	P41439	243 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	NAP1L1	P55209	391 aa	Known RBP	11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	SOX8	P57073	446 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	DCD	P81605	110 aa	Known RBP	11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	MYBPC3	Q14896	1274 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	ZIC1	Q15915	447 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	P3H1	Q32P28	736 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PRR30	Q53SZ7	412 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	DCAF10	Q5QP82	559 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	AADACL2	Q6P093	401 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	IGFL3	Q6UXB1	125 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	MRGPRE	Q86SM8	312 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	IQCK	Q8N0W5	287 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	DNAJC22	Q8N4W6	341 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	CLEC1A	Q8NC01	280 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	OR2Y1	Q8NGV0	311 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	FLVCR1-AS1	Q8TAF5	88 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PRR7	Q8TB68	274 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	ELMO1	Q92556	727 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	ALG3	Q92685	438 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PTER	Q96BW5	349 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	CASS4	Q9NQ75	786 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	SPHK1	Q9NYA1	384 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	LUZP4	Q9P127	313 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	MAP10	Q9P2G4	905 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	NDOR1	Q9UHB4	597 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	SRPK3	Q9UPE1	567 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	B3GNT3	Q9Y2A9	372 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PTRH2	Q9Y3E5	179 aa	Known RBP	11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	PRSS21	Q9Y6M0	314 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	DUSP10	Q9Y6W6	482 aa		11.44	□□□□□ -0.58
PTPN6-219	ENST00000542848	MYO9A	B2RTY4	2548 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848		A0A0J9YY10	115 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	SLC5A10	A0PJK1	596 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	WIPF3	A6NGB9	483 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	SOWAHD	A6NJG2	315 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	ZSCAN9	O15535	394 aa	Predicted RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	HCRTR1	O43613	425 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	IPO13	O94829	963 aa	Known RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	AP2A1	O95782	977 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	ALPP	P05187	535 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	OR56A5	P0C7T3	313 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	TPBGL	P0DKB5	382 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	MRPL49	Q13405	166 aa	Known RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	RAPSN	Q13702	412 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	POU6F1	Q14863	301 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	KIR2DS3	Q14952	304 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	KYNU	Q16719	465 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	SLC5A12	Q1EHB4	618 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	C1orf189	Q5VU69	101 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	LYPLAL1	Q5VWZ2	237 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	HIST2H2BC	Q6DN03	193 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	MRPL14	Q6P1L8	145 aa	Known RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	LINC00523	Q86TU6	105 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	TRIM73	Q86UV7	250 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	GALNT16	Q8N428	558 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	LRRC57	Q8N9N7	239 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	FAM71D	Q8N9W8	422 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	NACC2	Q96BF6	587 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	SNRNP40	Q96DI7	357 aa	Known RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	ZNF552	Q9H707	407 aa	Predicted RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	TXLNG	Q9NUQ3	528 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	P4HTM	Q9NXG6	502 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	IFT80	Q9P2H3	777 aa	Predicted RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	PLCL2	Q9UPR0	1127 aa		11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	TDRKH	Q9Y2W6	561 aa	Known RBP	11.43	□□□□□ -0.58
PTPN6-219	ENST00000542848	ISM1	B1AKI9	464 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848		F8W8V4	182 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	CBX6	O95503	412 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	FOXN2	P32314	431 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	BRD3	Q15059	726 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	DEFB110	Q30KQ9	67 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	NKAIN1	Q4KMZ8	207 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	SYTL3	Q4VX76	610 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	ZNF662	Q6ZS27	426 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	MICALCL	Q6ZW33	695 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	ZNF655	Q8N720	491 aa	Predicted RBP	11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	DENND1A	Q8TEH3	1009 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	TM9SF4	Q92544	642 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	C19orf60	Q96EN9	201 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	TTC1	Q99614	292 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	NDC1	Q9BTX1	674 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	TSGA10	Q9BZW7	698 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	ATP13A2	Q9NQ11	1180 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	ASF1B	Q9NVP2	202 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	DHCR7	Q9UBM7	475 aa	Known RBP	11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	AMFR	Q9UKV5	643 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	CDYL	Q9Y232	598 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	PPP2R2C	Q9Y2T4	447 aa		11.42	□□□□□ -0.58
PTPN6-219	ENST00000542848	CCDC78	A2IDD5	438 aa		11.41	□□□□□ -0.58
PTPN6-219	ENST00000542848	CCDC162P	A2VCL2	907 aa		11.41	□□□□□ -0.58
PTPN6-219	ENST00000542848	ERI2	A8K979	691 aa	Known RBP	11.41	□□□□□ -0.58
PTPN6-219	ENST00000542848	KRT86	O43790	486 aa		11.41	□□□□□ -0.58
PTPN6-219	ENST00000542848	CNOT3	O75175	753 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms