RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 DNAJC22Q8N4W6 341 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 ZNF655Q8N720 491 aaPredicted RBP11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 DENND1AQ8TEH3 1009 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 ELMO1Q92556 727 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 DLG3Q92796 817 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 ALS2CR12Q96Q35 445 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 FAM118BQ9BPY3 351 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 NDC1Q9BTX1 674 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 TSPY26PQ9H489 355 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 ATP13A2Q9NQ11 1180 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 SPHK1Q9NYA1 384 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 DHCR7Q9UBM7 475 aaKnown RBP11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 PLCL2Q9UPR0 1127 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC5A6Q9Y289 635 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 PRSS21Q9Y6M0 314 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 PCSK5Q92824 1860 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 CCDC78A2IDD5 438 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 GOLGA6L9A6NEM1 432 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ANKUB1A6NFN9 424 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 BTNL10A8MVZ5 291 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ISM1B1AKI9 464 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 AGPSO00116 658 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 CNOT3O75175 753 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ONECUT2O95948 504 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ALBP02768 609 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 UMODP07911 640 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 OR56A5P0C7T3 313 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 TPH1P17752 444 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 MSNP26038 577 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 FOXN2P32314 431 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 GCGRP47871 477 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ARSFP54793 590 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 AIMP2Q13155 320 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ELOAQ14241 798 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 POU6F1Q14863 301 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 DNAJC21Q5F1R6 531 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 PPP1R32Q7Z5V6 425 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 CISD2Q8N5K1 135 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 COG1Q8WTW3 980 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 FKBP10Q96AY3 582 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC22A18Q96BI1 424 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 C5orf34Q96MH7 638 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 TTC1Q99614 292 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 ENAMQ9NRM1 1142 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 IRAK4Q9NWZ3 460 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 EURLQ9NYK6 297 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 CDYLQ9Y232 598 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 TDRKHQ9Y2W6 561 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 PCDHGA10Q9Y5H3 936 aa11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 COPG1Q9Y678 874 aaKnown RBP11.56□□□□□ -0.56
CBX3P4-202ENST00000540428 METTL18O95568 372 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 CLDN1O95832 211 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 PIM1P11309 404 aaPredicted RBP11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 MMP11P24347 488 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 PEBP1P30086 187 aaKnown RBP11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 RAB28P51157 221 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 NAP1L1P55209 391 aaKnown RBP11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 SYTL3Q4VX76 610 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 YOD1Q5VVQ6 348 aaPredicted RBP11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 MICALCLQ6ZW33 695 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 FAM71DQ8N9W8 422 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 ALG3Q92685 438 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 INPP5DQ92835 1189 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC26A1Q9H2B4 701 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 WDR54Q9H977 334 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 AGPAT4Q9NRZ5 378 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC22A11Q9NSA0 550 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 RIMKLBQ9ULI2 386 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 EPN1Q9Y6I3 576 aaPredicted RBP11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
CBX3P4-202ENST00000540428 HIVEP3Q5T1R4 2406 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 A0A1B0GX78 115 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 ENO4A6NNW6 628 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 ERI2A8K979 691 aaKnown RBP11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 FKBP9O95302 570 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 IPO7O95373 1038 aaKnown RBP11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 S1PR4O95977 384 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 RPN2P04844 631 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 CTSBP07858 339 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 MAGP20916 626 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 PKLRP30613 574 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 DCTP40126 519 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 GLRBP48167 497 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC9A5Q14940 896 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 BRD3Q15059 726 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 PRAMEF13Q5VWM6 474 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 AADACL2Q6P093 401 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 AFTPHQ6ULP2 937 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 IGFL2Q6UWQ7 119 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 OVCH1Q7RTY7 1134 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 CUZD1Q86UP6 607 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC22A15Q8IZD6 547 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 LRRC57Q8N9N7 239 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms