RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 SF3A3Q12874 501 aaKnown RBP eCLIP12.34□□□□□ -0.437e-10■□□□□ 10.1
DDX55-206ENST00000539934 GPS1Q13098 491 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 SLC29A2Q14542 456 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 PLPP4Q5VZY2 271 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 OR8K5Q8NH50 307 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 ASB12Q8WXK4 309 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 MRPL48Q96GC5 212 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 C9orf72Q96LT7 481 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 RIPOR3Q96MK2 946 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 RNF157Q96PX1 679 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 NEU1Q99519 415 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CHID1Q9BWS9 393 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 ZNF556Q9HAH1 456 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 DNAJC17Q9NVM6 304 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 PSAT1Q9Y617 370 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 TXNL1O43396 289 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 RASAL1O95294 804 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 FAM58BPP0C7Q3 252 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 NDUFV2P19404 249 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 HMGCLP35914 325 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 FDFT1P37268 417 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 HTR3AP46098 478 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 EPHB1P54762 984 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 YWHAZP63104 245 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 CA9Q16790 459 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 PKN3Q6P5Z2 889 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 MPP5Q8N3R9 675 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 SLC24A4Q8NFF2 622 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CKAP2Q8WWK9 683 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CENPIQ92674 756 aaPredicted RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 MYLPFQ96A32 169 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 FUBP1Q96AE4 644 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 ZNF285Q96NJ3 590 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 PAPOLGQ9BWT3 736 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 TRIM2Q9C040 744 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX55-206ENST00000539934 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
DDX55-206ENST00000539934 COG4Q9H9E3 785 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 PCDH9Q9HC56 1237 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 STAP1Q9ULZ2 295 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 VSTM5A8MXK1 200 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 M0QZQ0 153 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 KCNH1O95259 989 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 CYP11A1P05108 521 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 TYRP1P17643 537 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 S100PP25815 95 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.44
DDX55-206ENST00000539934 ARNTP27540 789 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 WNT5AP41221 380 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ACTR1BP42025 376 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 PRIM2P49643 509 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ERVK-8P63133 956 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ZNF273Q14593 569 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ZMYND11Q15326 602 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 SSX2Q16385 188 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
DDX55-206ENST00000539934 PTRHD1Q6GMV3 140 aaKnown RBP12.33□□□□□ -0.44
DDX55-206ENST00000539934 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 CGB2Q6NT52 195 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 NPNTQ6UXI9 565 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 MSANTD1Q6ZTZ1 278 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 TRMT10CQ7L0Y3 403 aaKnown RBP12.33□□□□□ -0.44
DDX55-206ENST00000539934 LINC00523Q86TU6 105 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 TAC4Q86UU9 113 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ARMC8Q8IUR7 673 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 THEM5Q8N1Q8 247 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 PIWIL2Q8TC59 973 aaKnown RBP12.33□□□□□ -0.44
DDX55-206ENST00000539934 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 SMOQ99835 787 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ZNF670Q9BS34 389 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 FTHL17Q9BXU8 183 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 ULBP1Q9BZM6 244 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 SLC22A4Q9H015 551 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
DDX55-206ENST00000539934 AAASQ9NRG9 546 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 AP4E1Q9UPM8 1137 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 CENPXA8MT69 81 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 HIDE1A8MVS5 230 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 CLDN4O14493 209 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 SMPD2O60906 423 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 RFPL2O75678 378 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 PSKH1P11801 424 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 CRHR1P34998 444 aa12.33□□□□□ -0.44
DDX55-206ENST00000539934 SLC9A5Q14940 896 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms