RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 DHX34Q14147 1143 aaKnown RBP14.48□□□□□ -0.09
USB1-203ENST00000539737 ZNF789Q5FWF6 425 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 PCID2Q5JVF3 399 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 TSTD2Q5T7W7 516 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 C1QL3Q5VWW1 255 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 ZNF449Q6P9G9 518 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 AFTPHQ6ULP2 937 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 ZNF534Q76KX8 674 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 KLHL7Q8IXQ5 586 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 PPIL6Q8IXY8 311 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 MCUQ8NE86 351 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 HEXDCQ8WVB3 486 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 CPT1BQ92523 772 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.48□□□□□ -0.09
USB1-203ENST00000539737 CLIP3Q96DZ5 547 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 TUBB2BQ9BVA1 445 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 RAB33BQ9H082 229 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 PCMTD2Q9NV79 361 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 CUEDC1Q9NWM3 386 aaPredicted RBP14.48□□□□□ -0.09
USB1-203ENST00000539737 TCFL5Q9UL49 500 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 ZNF451Q9Y4E5 1061 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 CSAG2Q9Y5P2 127 aa14.48□□□□□ -0.09
USB1-203ENST00000539737 SVILO95425 2214 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 POLQO75417 2590 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 TLCD2A6NGC4 264 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 AGAP14A8MT82 685 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 CCL22O00626 93 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 CBX6O95503 412 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 RECKO95980 971 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 TNFRSF8P28908 595 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 RORAP35398 523 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 TERF1P54274 439 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 HSD11B2P80365 405 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 ACVR1Q04771 509 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 CACNG1Q06432 222 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 KRT33BQ14525 404 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 SLC9A5Q14940 896 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 ZRANB3Q5FWF4 1079 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 FNBP1LQ5T0N5 605 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 ANKRD22Q5VYY1 191 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 ARMC6Q6NXE6 501 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 ZNF517Q6ZMY9 492 aaPredicted RBP14.47□□□□□ -0.09
USB1-203ENST00000539737 PCGF5Q86SE9 256 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 DSELQ8IZU8 1212 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 NXPE1Q8N323 547 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 OR13J1Q8NGT2 312 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 CDKN2AIPNLQ96HQ2 116 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 RMDN2Q96LZ7 410 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 C12orf66Q96MD2 445 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 COPS8Q99627 209 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 MRM3Q9HC36 420 aaKnown RBP14.47□□□□□ -0.09
USB1-203ENST00000539737 GPR83Q9NYM4 423 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 ACSL5Q9ULC5 683 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 OTOGQ6ZRI0 2925 aa14.47□□□□□ -0.09
USB1-203ENST00000539737 TRBV5-4A0A0C4DH59 114 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 TCRBV7S3A2A0A539 114 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 CCDC78A2IDD5 438 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 WIPF3A6NGB9 483 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 TMEM150CB9EJG8 249 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 HCRTR1O43613 425 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 DPM1O60762 260 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 POLBP06746 335 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 ST6GAL1P15907 406 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 MGAT1P26572 445 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 PRAMEP78395 509 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 CKAP4Q07065 602 aaKnown RBP14.46□□□□□ -0.09
USB1-203ENST00000539737 DMPKQ09013 629 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 DEFB110Q30KQ9 67 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 C1orf189Q5VU69 101 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 IZUMO3Q5VZ72 239 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 HOOK3Q86VS8 718 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 SYTL1Q8IYJ3 562 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 OR4E2Q8NGC2 313 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 PNPLA2Q96AD5 504 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 SERPINB12Q96P63 405 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 VPS37BQ9H9H4 285 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 SAMD15Q9P1V8 674 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 SLC24A2Q9UI40 661 aa14.46□□□□□ -0.09
USB1-203ENST00000539737 FBN2P35556 2912 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 ARHGAP10A1A4S6 786 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 MGAT4DA6NG13 374 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
USB1-203ENST00000539737 NDC80O14777 642 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 DDAH2O95865 285 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 SLC35G4P0C7Q5 338 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 ACRV1P26436 265 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 KCTD19Q17RG1 926 aaPredicted RBP14.45□□□□□ -0.1
USB1-203ENST00000539737 AARS2Q5JTZ9 985 aaKnown RBP14.45□□□□□ -0.1
USB1-203ENST00000539737 RNASEH2BQ5TBB1 312 aaKnown RBP14.45□□□□□ -0.1
USB1-203ENST00000539737 LYPLAL1Q5VWZ2 237 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 TAS2R42Q7RTR8 314 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 TRIM73Q86UV7 250 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 OOSP2Q86WS3 158 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 NAT8LQ8N9F0 302 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 KRT12Q99456 494 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 TTC1Q99614 292 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 KIFC1Q9BW19 673 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 XKR8Q9H6D3 395 aa14.45□□□□□ -0.1
USB1-203ENST00000539737 CHRAC1Q9NRG0 131 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms