RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GFM2Q969S9 779 aaKnown RBP13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 IL17FQ96PD4 163 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 OR4K3Q96R72 315 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 SH2B3Q9UQQ2 575 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 E7EQ34 232 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 C1QTNF3-AMACRE9PGA6 284 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ANGPT2O15123 496 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 EGFP01133 1207 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 IDO1P14902 403 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 COL9A1P20849 921 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 CYP2A7P20853 494 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 NFKBIAP25963 317 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 TFF2Q03403 129 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ZRSR2Q15696 482 aaKnown RBP13.76□□□□□ -0.21
ACTN1-205ENST00000538545 WLSQ5T9L3 541 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 BLOC1S3Q6QNY0 202 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 MTERF1Q99551 399 aaKnown RBP13.76□□□□□ -0.21
ACTN1-205ENST00000538545 PKP4Q99569 1192 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 TRIM54Q9BYV2 358 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ACPTQ9BZG2 426 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 CROTQ9UKG9 612 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 NDUFAF1Q9Y375 327 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 H3BM21 787 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 MANBAO00462 879 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 SEC22BO75396 215 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 SLC22A3O75751 556 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 POP7O75817 140 aaKnown RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 MATN4O95460 622 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 CLDN9O95484 217 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 C8GP07360 202 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 ME2P23368 584 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 KIR2DL1P43626 348 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 CHIT1Q13231 466 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 PRKG2Q13237 762 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 TMEM196Q5HYL7 178 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 OGFOD2Q6N063 350 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 CYP20A1Q6UW02 462 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 DNAJC14Q6Y2X3 702 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 H0Y858 1186 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 H3BNX3 289 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 NME4O00746 187 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 MAP4P27816 1152 aaKnown RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 SLC6A12P48065 614 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 ACADVLP49748 655 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 MEF2AQ02078 507 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 INPP5AQ14642 412 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 STARD3Q14849 445 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 IMPG1Q17R60 797 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 SPATA24Q86W54 205 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 TDHQ8IZJ6 230 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 EGLN2Q96KS0 407 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 RIC8BQ9NVN3 520 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 STOX2Q9P2F5 926 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 STOML1Q9UBI4 398 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 PRPF19Q9UMS4 504 aaKnown RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 ZFR2Q9UPR6 939 aaKnown RBP13.75□□□□□ -0.21
ACTN1-205ENST00000538545 DLGAP4Q9Y2H0 992 aa13.75□□□□□ -0.21
ACTN1-205ENST00000538545 PABPN1LA6NDY0 278 aaKnown RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 NPC1O15118 1278 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 LRATO95237 230 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 FUCA1P04066 466 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 ASGR2P07307 311 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 TACR1P25103 407 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 VARSP26640 1264 aaKnown RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 IMPA1P29218 277 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 AP2B1P63010 937 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 TAF11Q15544 211 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 MAPRE2Q15555 327 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 ICE2Q659A1 982 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 AGTRAPQ6RW13 159 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.74□□□□□ -0.215e-8■■■■■ 204.6
ACTN1-205ENST00000538545 HCAR2Q8TDS4 363 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 UBTD2Q8WUN7 234 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 NTMT1Q9BV86 223 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 EBPLQ9BY08 206 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 TMCO1Q9UM00 188 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 PSMD11O00231 422 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 ADAM23O75077 832 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 AP2A2O94973 939 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 GSTM1P09488 218 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 EBLN1P0CF75 366 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 MPC1LP0DKB6 136 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 POLR2JP52435 117 aaKnown RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 KCNK10P57789 538 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 GSTM4Q03013 218 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 DUS1LQ6P1R4 473 aaKnown RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 C11orf96Q7Z7L8 435 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 KBTBD6Q86V97 674 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 NLRP8Q86W28 1048 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 NRSN1Q8IZ57 195 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 LIX1Q8N485 282 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 OR14C36Q8NHC7 312 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 ACAT2Q9BWD1 397 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 SPAG4Q9NPE6 437 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 MRPL40Q9NQ50 206 aaKnown RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 CMTM6Q9NX76 183 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 FBXL12Q9NXK8 326 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms