RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 RAP2AP10114 183 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 DCTP40126 519 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 RAB25P57735 213 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ERVK-21P61565 698 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 RIN1Q13671 783 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 MILR1Q7Z6M3 343 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 DPP9Q86TI2 863 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 PLCZ1Q86YW0 608 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 C9orf62Q8N4C0 152 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 AMER2Q8N7J2 671 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 C12orf29Q8N999 325 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 KCT2Q8NC54 265 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ASB15Q8WXK1 588 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 DNASE1L2Q92874 299 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 USP7Q93009 1102 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ZNF566Q969W8 418 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.47□□□□□ -0.73
RTN3-208ENST00000537981 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 C1orf74Q96LT6 269 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 LINC00052Q96N35 136 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 TSNARE1Q96NA8 513 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 GFM1Q96RP9 751 aaKnown RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 SPATA9Q9BWV2 254 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 SERHL2Q9H4I8 314 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ZCCHC4Q9H5U6 513 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 A0A0C4DFX4 3053 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 PIPSLA2A3N6 862 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 DDTLA6NHG4 134 aaPredicted RBP10.46□□□□□ -0.73
RTN3-208ENST00000537981 GNGT2O14610 69 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 NDUFS6O75380 124 aaKnown RBP10.46□□□□□ -0.73
RTN3-208ENST00000537981 ERN1O75460 977 aaKnown RBP10.46□□□□□ -0.73
RTN3-208ENST00000537981 DPEP1P16444 411 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 SDHBP21912 280 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 SLC19A1P41440 591 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 PIK3CBP42338 1070 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 RGS1Q08116 209 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 KRR1Q13601 381 aaKnown RBP10.46□□□□□ -0.73
RTN3-208ENST00000537981 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 TMPRSS9Q7Z410 1059 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 MIER2Q8N344 545 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 LRRC71Q8N4P6 559 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 CCNYQ8ND76 341 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 CLEC4CQ8WTT0 213 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 TMEM143Q96AN5 459 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 CSPG4P5Q96PW8 444 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 NIF3L1Q9GZT8 377 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 MIOSQ9NXC5 875 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 MKLN1Q9UL63 735 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 ALG5Q9Y673 324 aa10.46□□□□□ -0.73
RTN3-208ENST00000537981 FAM95CA0A1B0GW59 222 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 KLRG2A4D1S0 409 aaPredicted RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 TEX46H3BTG2 121 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 FZD9O00144 591 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 WBP4O75554 376 aaKnown RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 SERPINI2O75830 405 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 SUPT7LO94864 414 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 ADRA2AP08913 450 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 HSMCR30P0CW71 290 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 UMPSP11172 480 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 HGFP14210 728 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 JUNDP17535 347 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 RPL35P42766 123 aaKnown RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 UGT2B15P54855 530 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 HSD17B7P56937 341 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 TATDN3Q17R31 274 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 TIGD6Q17RP2 521 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 PRMT9Q6P2P2 845 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 CEP68Q76N32 757 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 SYVN1Q86TM6 617 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 SLC44A2Q8IWA5 706 aaPredicted RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 PLPP7Q8NBV4 271 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 ZNF680Q8NEM1 530 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 CLHC1Q8NHS4 586 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 SLC2A14Q8TDB8 520 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 APH1BQ8WW43 257 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 CELF6Q96J87 481 aaKnown RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 UGT2B28Q9BY64 529 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 BARHL1Q9BZE3 327 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 FAM83DQ9H4H8 585 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 CD274Q9NZQ7 290 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 MID2Q9UJV3 735 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 NOSIPQ9Y314 301 aaKnown RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 PCDHB5Q9Y5E4 795 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 PCDHGB2Q9Y5G2 931 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 PCDHGA9Q9Y5G4 932 aaKnown RBP10.46□□□□□ -0.74
RTN3-208ENST00000537981 AUP1Q9Y679 476 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 CLCA3PQ9Y6N3 262 aa10.46□□□□□ -0.74
RTN3-208ENST00000537981 QSER1Q2KHR3 1735 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CCDC182A6NF36 153 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 ASB14A6NK59 587 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 BBIP1A8MTZ0 92 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 H3BM21 787 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SIGLEC5O15389 551 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms