RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PROCP04070 461 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 MYF5P13349 255 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 GLB1P16278 677 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 RPA3P35244 121 aaPredicted RBP23.55■■□□□ 1.36
HMGA2-208ENST00000537429 NR0B2Q15466 257 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 TMEM26Q6ZUK4 368 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 SH3KBP1Q96B97 665 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 UCK1Q9HA47 277 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 MED4Q9NPJ6 270 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 ARL15Q9NXU5 204 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 NCKIPSDQ9NZQ3 722 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 LRIT1Q9P2V4 623 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 CIDEBQ9UHD4 219 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 RNF215Q9Y6U7 377 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 SH3BP5O60239 455 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 GUCA1CO95843 209 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 NAXDQ8IW45 347 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 CCDC138Q96M89 665 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 KCNK9Q9NPC2 374 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 SLC17A7Q9P2U7 560 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 COL5A1P20908 1838 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-208ENST00000537429 EME2A4GXA9 379 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-208ENST00000537429 PABPN1LA6NDY0 278 aaKnown RBP23.54■■□□□ 1.36
HMGA2-208ENST00000537429 UBXN8O00124 270 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 SLC16A8O95907 504 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 MPP2Q14168 576 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 HSP90B2PQ58FF3 399 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 CDKL4Q5MAI5 379 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 MBOAT1Q6ZNC8 495 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 ZNF438Q7Z4V0 828 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 PDPRQ8NCN5 879 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 OR6C4Q8NGE1 309 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 DENND1AQ8TEH3 1009 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 NRTNQ99748 197 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-208ENST00000537429 PLAGL1Q9UM63 463 aa23.54■■□□□ 1.36
HMGA2-208ENST00000537429 ANKRD12Q6UB98 2062 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 ASCC3Q8N3C0 2202 aaKnown RBP23.53■■□□□ 1.36
HMGA2-208ENST00000537429 GOLGA4Q13439 2230 aaKnown RBP23.53■■□□□ 1.36
HMGA2-208ENST00000537429 RHPN2P1A8MT19 583 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 KDM1AO60341 852 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 ANXA5P08758 320 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 ERGP11308 486 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 CKMT1AP12532 417 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 SLC18A1P54219 525 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 DAB2P98082 770 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 GPS2Q13227 327 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 ZNF761Q86XN6 746 aaPredicted RBP23.53■■□□□ 1.36
HMGA2-208ENST00000537429 EXT2Q93063 718 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 FAM111AQ96PZ2 611 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 NUDT4Q9NZJ9 180 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 SPATA7Q9P0W8 599 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 ICKQ9UPZ9 632 aa23.53■■□□□ 1.36
HMGA2-208ENST00000537429 FAM186AA6NE01 2351 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 TMEM120BA0PK00 339 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 NCF1BA6NI72 391 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 LILRA5A6NI73 299 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 NCF1CA8MVU1 366 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 SUPT3HB4E1H0 165 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 TM9SF1O15321 606 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 KLK8O60259 260 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 SUPT3HO75486 399 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 LDOC1O95751 146 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 NCF1P14598 390 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 IMPA1P29218 277 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 ETV4P43268 484 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 RAB28P51157 221 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 LIMK1P53667 647 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 NR1D2Q14995 579 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 ARHGAP19Q14CB8 494 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 PLCL1Q15111 1095 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 ZNF480Q8WV37 535 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 LCN9Q8WX39 176 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 JPH3Q8WXH2 748 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 RHBDF1Q96CC6 855 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 FBXL8Q96CD0 374 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 CNDP2Q96KP4 475 aaKnown RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 IL17FQ96PD4 163 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 SLC38A3Q99624 504 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 EGFL8Q99944 293 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 EVA1BQ9NVM1 165 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 CD274Q9NZQ7 290 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 STOX2Q9P2F5 926 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-208ENST00000537429 FTSJ1Q9UET6 329 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 LNPEPQ9UIQ6 1025 aa23.52■■□□□ 1.36
HMGA2-208ENST00000537429 CPED1A4D0V7 1026 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 CBFA2T3O75081 653 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 ZWINTO95229 277 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 PNLIPP16233 465 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 SHMT2P34897 504 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 HNMTP50135 292 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 CYP2A13Q16696 494 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 ZXDCQ2QGD7 858 aaPredicted RBP23.51■■□□□ 1.35
HMGA2-208ENST00000537429 GUSBP11Q6P575 273 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 AMIGO1Q86WK6 493 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 ARMC2Q8NEN0 867 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 BAHD1Q8TBE0 780 aaPredicted RBP23.51■■□□□ 1.35
HMGA2-208ENST00000537429 RDH11Q8TC12 318 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 RAB11FIP5Q9BXF6 653 aa23.51■■□□□ 1.35
HMGA2-208ENST00000537429 TBC1D10AQ9BXI6 508 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms