RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CNTN5O94779 1100 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 KLHL18O94889 574 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 LYNP07948 512 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 BMP7P18075 431 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 VIPR2P41587 438 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC7A9P82251 487 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC9A5Q14940 896 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 PTCRAQ6ISU1 281 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 NEK10Q6ZWH5 1172 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM129CQ86XR2 697 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 KBTBD7Q8WVZ9 684 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 SMAD5Q99717 465 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 ARHGAP9Q9BRR9 750 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 NOL11Q9H8H0 719 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TRNAU1APQ9NX07 287 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TMEM59LQ9UK28 342 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 A0A1W2PP55 124 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CCDC182A6NF36 153 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 HCRTO43612 131 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 KERAO60938 352 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CLDN7O95471 211 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 HOXD8P13378 290 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 IL12BP29460 328 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CTSOP43234 321 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 DSC3Q14574 896 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 EGFLAMQ63HQ2 1017 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 C10orf107Q8IVU9 208 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 KBTBD8Q8NFY9 601 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 ARMC5Q96C12 935 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 OBP2AQ9NY56 170 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 RAPGEFL1Q9UHV5 662 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 A0A1W2PQU0 124 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 AXIN1O15169 862 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ATP12AP54707 1039 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 USP46P62068 366 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC13A2Q13183 592 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ZSWIM7Q19AV6 140 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 LRRC73Q5JTD7 316 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 DENND5AQ6IQ26 1287 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 UXS1Q8NBZ7 420 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 GLB1L3Q8NCI6 653 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ZCCHC10Q8TBK6 192 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 PTCD3Q96EY7 689 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 PAAF1Q9BRP4 392 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 STRA6Q9BX79 667 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SLCO1B3Q9NPD5 702 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 HCFC2Q9Y5Z7 792 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 KAT6AQ92794 2004 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 DNAJA2O60884 412 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 AGR2O95994 175 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ITGB1P05556 798 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 LINC00032P0C843 101 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 CDH13P55290 713 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 PM20D1Q6GTS8 502 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 OR13C4Q8NGS5 318 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ZBED6CLQ96FA7 236 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 KCNN2Q9H2S1 579 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SPAG4Q9NPE6 437 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF624Q9P2J8 865 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 C2orf74A8MZ97 194 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SCN2BO60939 215 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 COX4I1P13073 169 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 HNRNPLP14866 589 aaKnown RBP eCLIP11.04□□□□□ -0.642e-12■□□□□ 8.8
AMBRA1-211ENST00000533727 RBMS1P29558 406 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 CCKBRP32239 447 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC1A2P43004 574 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ZBTB46Q86UZ6 589 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 TMEM139Q8IV31 216 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 RGMAQ96B86 450 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 CMTM7Q96FZ5 175 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC38A2Q96QD8 506 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 HOPXQ9BPY8 73 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 FNDC11Q9BVV2 318 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 SLITRK2Q9H156 845 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 PDE7BQ9NP56 450 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 AJAP1Q9UKB5 411 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 CARD8Q9Y2G2 431 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 C2orf71A6NGG8 1288 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 MCIDASD6RGH6 385 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 MGRN1O60291 552 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 TFPIP10646 304 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 BNIP1Q12981 228 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 QPRTQ15274 297 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 TBC1D25Q3MII6 688 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 METTL21CQ5VZV1 264 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 FSTL4Q6MZW2 842 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 DPY19L3Q6ZPD9 716 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF605Q86T29 641 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 C2orf73Q8N5S3 287 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 EPB41L1Q9H4G0 881 aa11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 NLE1Q9NVX2 485 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-211ENST00000533727 CIDEBQ9UHD4 219 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms