RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 EFHD1Q9BUP0 239 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 TBC1D10AQ9BXI6 508 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 UCK1Q9HA47 277 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 PAK5Q9P286 719 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 CRLS1Q9UJA2 301 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 RIMKLBQ9ULI2 386 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 JRKLQ9Y4A0 524 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 SLC30A1Q9Y6M5 507 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 MGAT4DA6NG13 374 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 LILRA5A6NI73 299 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 OR52A4PA6NMU1 304 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 PDZK1P1A8MUH7 402 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 AGRPO00253 132 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 HGSO14964 777 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 DYRK3O43781 588 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 VIPP01282 170 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 CCL4P13236 92 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 VCLP18206 1134 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 TCN2P20062 427 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 KLK2P20151 261 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 ITGALP20701 1170 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 ACRV1P26436 265 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 AKT1P31749 480 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 FOXN2P32314 431 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 TRA2AQ13595 282 aaKnown RBP eCLIP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF658BQ4V348 819 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 CCDC38Q502W7 563 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 PHF19Q5T6S3 580 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 METRNLQ641Q3 311 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 WDR74Q6RFH5 385 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 TMEM26Q6ZUK4 368 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 DET1Q7L5Y6 550 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 ARHGAP22Q7Z5H3 698 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 SERPINA9Q86WD7 417 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 PIANPQ8IYJ0 282 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 SLC35F6Q8N357 371 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 DNAAF3Q8N9W5 541 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 AVL9Q8NBF6 648 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 OR13J1Q8NGT2 312 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 OR2L2Q8NH16 312 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 OR10G6Q8NH81 332 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 KIF18AQ8NI77 898 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 PBKQ96KB5 322 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF778Q96MU6 729 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 COPS8Q99627 209 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 DPYSL5Q9BPU6 564 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 STN1Q9H668 368 aaKnown RBP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 SLC40A1Q9NP59 571 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 MLXIPLQ9NP71 852 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 SLC2A6Q9UGQ3 507 aa8.24□□□□□ -1.09
SSBP3-212ENST00000528930 TTC7AQ9ULT0 858 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-212ENST00000528930 MDC1Q14676 2089 aaKnown RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 LOC101059948A0A1B0GTJ6 334 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 C17orf113A0A1B0GUU1 675 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CCDC78A2IDD5 438 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CCDC162PA2VCL2 907 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 OR51F1A6NGY5 319 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 E7EVH7 732 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ZSCAN12O43309 604 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 APRTP07741 180 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 FGF3P11487 239 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ATP1B2P14415 290 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 COX6B1P14854 86 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 FOSL1P15407 271 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ADRA1DP25100 572 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PBLDP30039 288 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 LMAN1P49257 510 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PRLHRP49683 370 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ACVR1Q04771 509 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CACNG1Q06432 222 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 RPE65Q16518 533 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CYP1B1Q16678 543 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 TSTD2Q5T7W7 516 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PAPD7Q5XG87 772 aaKnown RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 JMJD6Q6NYC1 403 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 TTC27Q6P3X3 843 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PPP1R21Q6ZMI0 780 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF534Q76KX8 674 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF771Q7L3S4 317 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 APLFQ8IW19 511 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 LILRA3Q8N6C8 439 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CLDN19Q8N6F1 224 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 BMPERQ8N8U9 685 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 GPR150Q8NGU9 434 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 COG1Q8WTW3 980 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 HEXDCQ8WVB3 486 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 NCSTNQ92542 709 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 KIAA1143Q96AT1 154 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 C19orf60Q96EN9 201 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 AHCYL2Q96HN2 611 aaKnown RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 TAAR9Q96RI9 348 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 DDA1Q9BW61 102 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 SPRY4Q9C004 299 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CXXC4Q9H2H0 198 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 EPB41L1Q9H4G0 881 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 ZFP64Q9NPA5 681 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms