RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PANX1Q96RD7 426 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 EBPLQ9BY08 206 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 KMOO15229 486 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 CYP7B1O75881 506 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ITGB1P05556 798 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 COL6A1P12109 1028 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ARSDP51689 593 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ANKRD34AQ69YU3 496 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 CADM2Q8N3J6 435 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ZNF366Q8N895 744 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 VMP1Q96GC9 406 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
LTBP3-210ENST00000528516 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
LTBP3-210ENST00000528516 INTS7Q9NVH2 962 aaKnown RBP17.54■□□□□ 0.4
LTBP3-210ENST00000528516 MARCH4Q9P2E8 410 aaPredicted RBP17.54■□□□□ 0.4
LTBP3-210ENST00000528516 RABL2BQ9UNT1 228 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 EVPLQ92817 2033 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 LOC100130705A0A1B0GUX0 176 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ANXA6P08133 673 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 TACR2P21452 398 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 EPS8Q12929 822 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ZNF404Q494X3 552 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 PYCR3Q53H96 274 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 GALNT13Q8IUC8 556 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 TMEM159Q96B96 161 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 ACBD6Q9BR61 282 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 BEX2Q9BXY8 128 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 PRDM8Q9NQV8 689 aa17.54■□□□□ 0.4
LTBP3-210ENST00000528516 AREL1O15033 823 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 ARHGEF9O43307 516 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 FGF1P05230 155 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 POU2F1P14859 743 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 GRK3P35626 688 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 PIGAP37287 484 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TTPAP49638 278 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 EPHB3P54753 998 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 FAM174BQ3ZCQ3 159 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 SIRPB2Q5JXA9 342 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 AMER2Q8N7J2 671 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 C14orf119Q9NWQ9 140 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 EHD3Q9NZN3 535 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 SLAMF8Q9P0V8 285 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 RGS14O43566 566 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 KCNK2O95069 426 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 WARSP23381 471 aaKnown RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 POLR2JP52435 117 aaKnown RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 ZNF284Q2VY69 593 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TPRG1LQ5T0D9 272 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 USP51Q70EK9 711 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 STX19Q8N4C7 294 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TMEM151AQ8N4L1 468 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 UBASH3BQ8TF42 649 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 MIEF1Q9NQG6 463 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 DNMT3BQ9UBC3 853 aaKnown RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TEX28O15482 410 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 RPP40O75818 363 aaKnown RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 SERPINI2O75830 405 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 NDST3O95803 873 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 SULT1C3Q6IMI6 304 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 POLR2AP24928 1970 aaKnown RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 A0A1W2PQ72 361 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 ISPDA4D126 451 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TRIM64A6NGJ6 449 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 hCG_2039718K7EN88 272 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 PRMT5O14744 637 aaPredicted RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 PRKCAP17252 672 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 AHSA2Q719I0 299 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 LARP4Q71RC2 724 aaKnown RBP eCLIP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 PROSER1Q86XN7 944 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TMEM125Q96AQ2 219 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 FKBP10Q96AY3 582 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 ALOXE3Q9BYJ1 711 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 NECTIN3Q9NQS3 549 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 TOR4AQ9NXH8 423 aa17.53■□□□□ 0.4
LTBP3-210ENST00000528516 ZNF490Q9ULM2 529 aaPredicted RBP17.53■□□□□ 0.4
LTBP3-210ENST00000528516 H7C4K7 107 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 AIREO43918 545 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 ALPLP05186 524 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 RAP2AP10114 183 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 ACOX1Q15067 660 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 CTU2Q2VPK5 515 aaKnown RBP17.52■□□□□ 0.4
LTBP3-210ENST00000528516 AURKBQ96GD4 344 aaPredicted RBP17.52■□□□□ 0.4
LTBP3-210ENST00000528516 UGT2B28Q9BY64 529 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 CCDC177Q9NQR7 707 aaPredicted RBP17.52■□□□□ 0.4
LTBP3-210ENST00000528516 FAM25AB3EWG3 89 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 FAM25CB3EWG5 89 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 FAM25GB3EWG6 89 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 PRAMEF1O95521 474 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 EIF2DP41214 584 aaKnown RBP17.52■□□□□ 0.4
LTBP3-210ENST00000528516 UAP1L1Q3KQV9 507 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 ARL14EPQ8N8R7 260 aaPredicted RBP17.52■□□□□ 0.4
LTBP3-210ENST00000528516 OR9Q1Q8NGQ5 310 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 FRS2Q8WU20 508 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 ZNF717Q9BY31 904 aaPredicted RBP17.52■□□□□ 0.4
LTBP3-210ENST00000528516 GTF2IRD1Q9UHL9 959 aa17.52■□□□□ 0.4
LTBP3-210ENST00000528516 GPR39O43194 453 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 DDX5P17844 614 aaKnown RBP17.52■□□□□ 0.39
LTBP3-210ENST00000528516 MSH3P20585 1137 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 UFM1P61960 85 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms