RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 POP4O95707 220 aaKnown RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 OR56A5P0C7T3 313 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 HSPA14Q0VDF9 509 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 PRAMEF9Q5VWM5 478 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 NEK5Q6P3R8 708 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 SERPINA13PQ6UXR4 307 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 EP400NLQ6ZTU2 488 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 Q6ZVU0 165 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 LRRC70Q7Z2Q7 622 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 AADATQ8N5Z0 425 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 ZNF641Q96N77 438 aaPredicted RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 OR52E6Q96RD3 313 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 THUMPD3Q9BV44 507 aaKnown RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 PAIP1Q9H074 479 aaKnown RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 SERHLQ9NQF3 203 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 THEGQ9P2T0 379 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 GRM6O15303 877 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 KRT6AP02538 564 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 KRT6BP04259 564 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 LINC00271P0C7V0 271 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 KRT6CP48668 564 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 GGTA1PQ4G0N0 100 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 FAM98BQ52LJ0 330 aaKnown RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 OTUD3Q5T2D3 398 aaPredicted RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 TTC23LQ6PF05 361 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 ABRAXAS1Q6UWZ7 409 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 C10orf111Q8N326 155 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 MYLIPQ8WY64 445 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 UTS2RQ9UKP6 389 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 LAMA3Q16787 3333 aa17.14■□□□□ 0.34
USH1C-205ENST00000527020 DEAF1O75398 565 aaPredicted RBP17.14■□□□□ 0.33
USH1C-205ENST00000527020 TRMUO75648 421 aaKnown RBP17.14■□□□□ 0.33
USH1C-205ENST00000527020 C8GP07360 202 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 HOXB9P17482 250 aaPredicted RBP17.14■□□□□ 0.33
USH1C-205ENST00000527020 PPM1AP35813 382 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 NEK2P51955 445 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 ARSFP54793 590 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 RPS14P62263 151 aaKnown RBP17.14■□□□□ 0.33
USH1C-205ENST00000527020 CREMQ03060 361 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 CHRNB3Q05901 458 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 PDE4DIPQ5VU43 2346 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 C1orf53Q5VUE5 145 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 LPCAT2Q7L5N7 544 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 PHACTR4Q8IZ21 702 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 FBXO30Q8TB52 745 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 PYCR2Q96C36 320 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 HIC2Q96JB3 615 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 P2RY13Q9BPV8 354 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 BEGAINQ9BUH8 593 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 CEP44Q9C0F1 390 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 OCEL1Q9H607 264 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 ADGRE2Q9UHX3 823 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 SLC25A13Q9UJS0 675 aa17.14■□□□□ 0.33
USH1C-205ENST00000527020 PRRC2BQ5JSZ5 2229 aaKnown RBP17.14■□□□□ 0.33
USH1C-205ENST00000527020 GFYI3L273 518 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CCL16O15467 120 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 SGTAO43765 313 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 MTX2O75431 263 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 B3GALT4O96024 378 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 ALPLP05186 524 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 ATP1B2P14415 290 aaPredicted RBP17.13■□□□□ 0.33
USH1C-205ENST00000527020 TACR1P25103 407 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 PTPN6P29350 595 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 MTHFRP42898 656 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 GZMMP51124 257 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CLDN8P56748 225 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CTBSQ01459 385 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 PTCHD3Q3KNS1 767 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 NECAB2Q7Z6G3 386 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CALHM3Q86XJ0 350 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 KREMEN2Q8NCW0 462 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 SELENOMQ8WWX9 145 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 TBCDQ9BTW9 1192 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 KAT8Q9H7Z6 458 aaKnown RBP17.13■□□□□ 0.33
USH1C-205ENST00000527020 PPT2Q9UMR5 302 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 PCDHB14Q9Y5E9 798 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 NOTCH4Q99466 2003 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 ELOVL7A1L3X0 281 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 NEDD8-MDP1E9PL57 170 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 H0YAE9 185 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 MPC1LP0DKB6 136 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CSF2RAP15509 400 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 PRPH2P23942 346 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 ALDH3A2P51648 485 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 DAG1Q14118 895 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 LRIF1Q5T3J3 769 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 TCAIMQ8N3R3 496 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 L3MBTL4Q8NA19 623 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 OR2A12Q8NGT7 310 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 TCEAL4Q96EI5 215 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CPPED1Q9BRF8 314 aaPredicted RBP17.13■□□□□ 0.33
USH1C-205ENST00000527020 NPLQ9BXD5 320 aaPredicted RBP17.13■□□□□ 0.33
USH1C-205ENST00000527020 LIN28AQ9H9Z2 209 aaKnown RBP17.13■□□□□ 0.33
USH1C-205ENST00000527020 ASAH2Q9NR71 780 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 MAN2B2Q9Y2E5 1009 aa17.13■□□□□ 0.33
USH1C-205ENST00000527020 CXCR6O00574 342 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 GSTA4O15217 222 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms