RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 ACTR10Q9NZ32 417 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 DMGDHQ9UI17 866 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 SLC39A10Q9ULF5 831 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 BTRCQ9Y297 605 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 A0A087WV48 116 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 TCRBV9S1A1TA0A576 114 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 C9orf172C9J069 976 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 MAP3K7O43318 606 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
VEGFA-225ENST00000523950 CHRM5P08912 532 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-225ENST00000523950 MSL3P1P0C860 447 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 CDH3P22223 829 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 PRDX3P30048 256 aaKnown RBP12.16□□□□□ -0.46
VEGFA-225ENST00000523950 SLC5A2P31639 672 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 HSD17B2P37059 387 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 ARL4DP49703 201 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 PPP1CAP62136 330 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 HSD11B2P80365 405 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 ACY1Q03154 408 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
VEGFA-225ENST00000523950 GRB7Q14451 532 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 IL11RAQ14626 422 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 ARHGAP19Q14CB8 494 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 SLC5A12Q1EHB4 618 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 RBM20Q5T481 1227 aaKnown RBP12.16□□□□□ -0.46
VEGFA-225ENST00000523950 TMTC4Q5T4D3 741 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 HECTD2Q5U5R9 776 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 LRRC69Q6ZNQ3 347 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 ZC3HC1Q86WB0 502 aaKnown RBP12.16□□□□□ -0.46
VEGFA-225ENST00000523950 CPNE9Q8IYJ1 553 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 GPATCH11Q8N954 259 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 OR2L8Q8NGY9 312 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 FMO2Q99518 471 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 SLC30A3Q99726 388 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 CPNE1Q99829 537 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 CHRNA10Q9GZZ6 450 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 XKR8Q9H6D3 395 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 LRRC4CQ9HCJ2 640 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 GALPQ9UBC7 116 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 LNPEPQ9UIQ6 1025 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 VWA7Q9Y334 891 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 NFS1Q9Y697 457 aa12.16□□□□□ -0.46
VEGFA-225ENST00000523950 IGHV5-51A0A0C4DH38 117 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 FAM159BA6NKW6 160 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 SRRM3A6NNA2 597 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-225ENST00000523950 ZNF839A8K0R7 811 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 GFYI3L273 518 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 MYO1CO00159 1063 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 POLR1CO15160 346 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-225ENST00000523950 PRAMEF10O60809 474 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 F7P08709 466 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-225ENST00000523950 LIPCP11150 499 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 ERGP11308 486 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 FDXRP22570 491 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 MAP4P27816 1152 aaKnown RBP12.15□□□□□ -0.46
VEGFA-225ENST00000523950 PHBP35232 272 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 GP5P40197 560 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 BDKRB1P46663 353 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 SEPHS1P49903 392 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 GPX6P59796 221 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 SP140Q13342 867 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 ANKS6Q68DC2 871 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 SPESP1Q6UW49 350 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 RASGRP3Q8IV61 690 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 IFT20Q8IY31 132 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 MYO1HQ8N1T3 1032 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 D2HGDHQ8N465 521 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 OR9A1PQ8NGU1 263 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 OR8K5Q8NH50 307 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 KCNE4Q8WWG9 221 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 ASB11Q8WXH4 323 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 VPS39Q96JC1 886 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 FCRL4Q96PJ5 515 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 MCMBPQ9BTE3 642 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 POPDC3Q9HBV1 291 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 PDE7BQ9NP56 450 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 SLC17A6Q9P2U8 582 aa12.15□□□□□ -0.46
VEGFA-225ENST00000523950 A0A0J9YY10 115 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 FAM95CA0A1B0GW59 222 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 ARHGEF33A8MVX0 844 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 STMND1H3BQB6 276 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 SLC16A5O15375 505 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 ZBTB14O43829 449 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 C1QAP02745 245 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 C8GP07360 202 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 FGF5P12034 268 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 UGT2B7P16662 529 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 MCM3P25205 808 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 CDKN2DP55273 166 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 IL2P60568 153 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 TIAL1Q01085 375 aaKnown RBP eCLIP12.14□□□□□ -0.47
VEGFA-225ENST00000523950 NAA25Q14CX7 972 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 CYP2A13Q16696 494 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 PAQR3Q6TCH7 311 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 CYHR1Q6ZMK1 362 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms