RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TEX44Q53QW1 395 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 TFDP3Q5H9I0 405 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 ZNF324BQ6AW86 544 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 ZNF449Q6P9G9 518 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 SASS6Q6UVJ0 657 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 KDELC1Q6UW63 502 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 RPTNQ6XPR3 784 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 NAPRTQ6XQN6 538 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 OVCH1Q7RTY7 1134 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 BRIX1Q8TDN6 353 aaKnown RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 TFGQ92734 400 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 TADA1Q96BN2 335 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 FAF2Q96CS3 445 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 SPSB2Q99619 263 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 APOL2Q9BQE5 337 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 CRB3Q9BUF7 120 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 YIPF2Q9BWQ6 316 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 TFB2MQ9H5Q4 396 aaKnown RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■■■■□ 20.2
SDCBP-211ENST00000523441 STOX2Q9P2F5 926 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 KLHL8Q9P2G9 620 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 PLCL2Q9UPR0 1127 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 PCDHGB6Q9Y5F9 930 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 A0A1B0GX78 115 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 PROSCO94903 275 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 RASAL1O95294 804 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 AGTP01019 485 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 KRT1P04264 644 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 CHRM5P08912 532 aaPredicted RBP11.16□□□□□ -0.62
SDCBP-211ENST00000523441 MAGP20916 626 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 SMSP52788 366 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 CSE1LP55060 971 aaKnown RBP11.16□□□□□ -0.62
SDCBP-211ENST00000523441 OLIG2Q13516 323 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 MESDQ14696 234 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 SLC1A5Q15758 541 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 ODF2Q5BJF6 829 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 MTFR2Q6P444 385 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 XKRXQ6PP77 449 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 MEX3BQ6ZN04 569 aaKnown RBP11.16□□□□□ -0.62
SDCBP-211ENST00000523441 COX15Q7KZN9 410 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 OR13C4Q8NGS5 318 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 DLG3Q92796 817 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 OXNAD1Q96HP4 312 aaPredicted RBP11.16□□□□□ -0.62
SDCBP-211ENST00000523441 MRGPRX2Q96LB1 330 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 FICDQ9BVA6 458 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 FSD1LQ9BXM9 530 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 OR52A5Q9H2C5 316 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 MVB12BQ9H7P6 319 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 EURLQ9NYK6 297 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 HACD3Q9P035 362 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 ASF1AQ9Y294 204 aa11.16□□□□□ -0.62
SDCBP-211ENST00000523441 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 A0A087X0T9 212 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 A0A1B0GTL3 188 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 C17orf113A0A1B0GUU1 675 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 LOC285095A0A1B0GVY8 99 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 MAP2K7O14733 419 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 FFAR3O14843 346 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 GPR42O15529 346 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 SLC19A2O60779 497 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 CLDN14O95500 239 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 FAM228BP0C875 321 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 PRSS56P0CW18 603 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 PYGMP11217 842 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 ATP1B2P14415 290 aaPredicted RBP11.15□□□□□ -0.62
SDCBP-211ENST00000523441 ACPPP15309 386 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 PRLHRP49683 370 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 CDKN1CP49918 316 aaPredicted RBP11.15□□□□□ -0.62
SDCBP-211ENST00000523441 TNFSF10P50591 281 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 BOP1Q14137 746 aaKnown RBP11.15□□□□□ -0.62
SDCBP-211ENST00000523441 KAZNQ674X7 775 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 C3P1Q6ZMU1 363 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 TAS2R42Q7RTR8 314 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 PID1Q7Z2X4 250 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 MCATQ8IVS2 390 aaKnown RBP11.15□□□□□ -0.62
SDCBP-211ENST00000523441 KBTBD2Q8IY47 623 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 DNAJC22Q8N4W6 341 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 CLDN19Q8N6F1 224 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 HAUS1Q96CS2 278 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 LMF1Q96S06 567 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 COPS8Q99627 209 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 HSD3B7Q9H2F3 369 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 CUTCQ9NTM9 273 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 SMOXQ9NWM0 555 aa11.15□□□□□ -0.62
SDCBP-211ENST00000523441 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.15□□□□□ -0.62
SDCBP-211ENST00000523441 NCOA6Q14686 2063 aaPredicted RBP11.15□□□□□ -0.63
SDCBP-211ENST00000523441 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-211ENST00000523441 NSG1A0A0A6YYJ2 146 aa11.14□□□□□ -0.63
SDCBP-211ENST00000523441 C2orf81A6NN90 581 aa11.14□□□□□ -0.63
SDCBP-211ENST00000523441 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
SDCBP-211ENST00000523441 DSCR3O14972 297 aa11.14□□□□□ -0.63
SDCBP-211ENST00000523441 WFS1O76024 890 aa11.14□□□□□ -0.63
SDCBP-211ENST00000523441 WDPCPO95876 746 aa11.14□□□□□ -0.63
SDCBP-211ENST00000523441 PIM1P11309 404 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-211ENST00000523441 PEBP1P30086 187 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms