RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ETNK2Q9NVF9 386 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 TRNAU1APQ9NX07 287 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 TBK1Q9UHD2 729 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 TRPS1Q9UHF7 1281 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 ZNHIT2Q9UHR6 403 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 MOSPD1Q9UJG1 213 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 TINAGQ9UJW2 476 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 FZD10Q9ULW2 581 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 SNX7Q9UNH6 387 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 AP4E1Q9UPM8 1137 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 HEY1Q9Y5J3 304 aa7.11□□□□□ -1.27
CTNNA1-227ENST00000521387 SPTBP11277 2137 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 HCFC1P51610 2035 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 EXOC1LA0A1B0GW35 172 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 A0A1W2PPM1 405 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CFAP69A5D8W1 941 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 MYO1CO00159 1063 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CACNB4O00305 520 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 SPRY1O43609 319 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 KIF1CO43896 1103 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CTAG2O75638 210 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 IGLV3-25P01717 112 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 BRAFP15056 766 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 DESP17661 470 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 SERPINH1P50454 418 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 BASP1P80723 227 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 ARF5P84085 180 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 GBE1Q04446 702 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 ILF3Q12906 894 aaKnown RBP eCLIP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CBLBQ13191 982 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 EFTUD2Q15029 972 aaKnown RBP eCLIP7.1□□□□□ -1.278e-9■■■□□ 15.7
CTNNA1-227ENST00000521387 SLC25A52Q3SY17 297 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 C5orf22Q49AR2 442 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 ALFQ53S48 1182 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 RPUSD3Q6P087 351 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 BNIPLQ7Z465 357 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CPLX4Q7Z7G2 160 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 TRABD2AQ86V40 505 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 TMEM151BQ8IW70 566 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 AGGF1Q8N302 714 aaeCLIP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 SVOPQ8N4V2 548 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 DCAF4L2Q8NA75 395 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 FBXO36Q8NEA4 188 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 OR7D4Q8NG98 312 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 FBF1Q8TES7 1133 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 PYROXD1Q8WU10 500 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CKAP2Q8WWK9 683 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 TM9SF4Q92544 642 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 MR1Q95460 341 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 MRRFQ96E11 262 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 SERPINB11Q96P15 392 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CSPG4P5Q96PW8 444 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 SLC2A13Q96QE2 648 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 ZNF670Q9BS34 389 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 C2orf49Q9BVC5 232 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 TBC1D10AQ9BXI6 508 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 PHACTR1Q9C0D0 580 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 CEP44Q9C0F1 390 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 ETNK1Q9HBU6 452 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 C1GALT1Q9NS00 363 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 PAK5Q9P286 719 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 MEMO1Q9Y316 297 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 ACTL7BQ9Y614 415 aa7.1□□□□□ -1.27
CTNNA1-227ENST00000521387 H7C1Q1 480 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 SPAG7O75391 227 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 IPO13O94829 963 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 METTL18O95568 372 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 RAB40ALP0C0E4 278 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 FOLR1P15328 257 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 ZFXP17010 805 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 FOXN2P32314 431 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 ELK3P41970 407 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 MAGEA6P43360 314 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 MAPK9P45984 424 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 GNPDA1P46926 289 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 POLD2P49005 469 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 PPM1FP49593 454 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 DGKQP52824 942 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 YWHAZP63104 245 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 SF3A3Q12874 501 aaKnown RBP eCLIP7.09□□□□□ -1.273e-7■■■□□ 16.9
CTNNA1-227ENST00000521387 IFT88Q13099 833 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 XRCC4Q13426 336 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 NFATC2Q13469 925 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 KCNAB1Q14722 419 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 RASA2Q15283 850 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 DEFB113Q30KQ7 82 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 KRTAP24-1Q3LI83 254 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 RABGAP1LQ5R372 815 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 CES4AQ5XG92 561 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 NCBP2-AS2Q69YL0 99 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 C16orf47Q6ZP98 133 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 C3orf62Q6ZUJ4 267 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 MICALCLQ6ZW33 695 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 PIGWQ7Z7B1 504 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 MRGPREQ86SM8 312 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 CAND1Q86VP6 1230 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms