RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 BPIFB1Q8TDL5 484 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 CLP1Q92989 425 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 PTBP2Q9UKA9 531 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 TMEM202A6NGA9 273 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 HNRNPRO43390 633 aaKnown RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 RECQL5O94762 991 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 ALBP02768 609 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 RPS3P23396 243 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLK4-206ENST00000520878 AQP1P29972 269 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 CDKL1Q00532 357 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 MEF2AQ02078 507 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 TMEM240Q5SV17 173 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 OGFRL1Q5TC84 451 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 ADIPOR2Q86V24 386 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 SATL1Q86VE3 508 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 CXorf40AQ8TE69 158 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 EGLN2Q96KS0 407 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 RUBCNLQ9H714 662 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 YY1AP1Q9H869 796 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 THG1LQ9NWX6 298 aaKnown RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 DYRK1BQ9Y463 629 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 KCNE2Q9Y6J6 123 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 ZNF821O75541 412 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 TNFAIP8O95379 198 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 PRNPP04156 253 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 EBLN1P0CF75 366 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 METAP1P53582 386 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 PRKCQQ04759 706 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 ZDHHC20Q5W0Z9 365 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 TMEM215Q68D42 235 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 OR4F3Q6IEY1 312 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 PHYKPLQ8IUZ5 450 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 CBARPQ8N350 705 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 VWCEQ96DN2 955 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 BTBD9Q96Q07 612 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 BDH2Q9BUT1 245 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 LRRC3Q9BY71 257 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 CCDC90BQ9GZT6 254 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 GAPDHSO14556 408 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 LILRB3O75022 631 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 NFATC1O95644 943 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 BCKDHAP12694 445 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 DDX6P26196 483 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLK4-206ENST00000520878 MAPK1P28482 360 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 PDHA2P29803 388 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 SEC13P55735 322 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 CAMK2GQ13555 558 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 RCAN2Q14206 197 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 FRG2Q64ET8 278 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 ZCCHC8Q6NZY4 707 aaKnown RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 AGTRAPQ6RW13 159 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 MINDY1Q8N5J2 469 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
CLK4-206ENST00000520878 GATA6Q92908 595 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 GLYATL1Q969I3 302 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 BIRC7Q96CA5 298 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 FRG2BQ96QU4 278 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 RIMS3Q9UJD0 308 aa11.08□□□□□ -0.64
CLK4-206ENST00000520878 NLRC5Q86WI3 1866 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 EI24O14681 340 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 MATN4O95460 622 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 PCCBP05166 539 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 ANXA6P08133 673 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 RPL10P27635 214 aaKnown RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 SOAT1P35610 550 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 ADARP55265 1226 aaKnown RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 ESRRGP62508 458 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 CYP4F2P78329 520 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 LAPTM5Q13571 262 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 SPIDRQ14159 915 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 SELPLGQ14242 412 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 PDCD4Q53EL6 469 aaKnown RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 RD3Q7Z3Z2 195 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 KIAA2013Q8IYS2 634 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 TMEM132CQ8N3T6 1108 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 PDPRQ8NCN5 879 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 PHC3Q8NDX5 983 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 TIFAQ96CG3 184 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 SH3GL1Q99961 368 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 ZSCAN5AQ9BUG6 496 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 C9orf16Q9BUW7 83 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 MAFFQ9ULX9 164 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 PLAGL1Q9UM63 463 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 NUMA1Q14980 2115 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 LIN7AO14910 233 aaPredicted RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 CASQ2O14958 399 aaPredicted RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 LSM1O15116 133 aaKnown RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 DEAF1O75398 565 aaPredicted RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 CYP17A1P05093 508 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 ZNF30P17039 623 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 CSNK1DP48730 415 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 OGFOD2Q6N063 350 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 SPESP1Q6UW49 350 aa11.07□□□□□ -0.64
CLK4-206ENST00000520878 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 THOC6Q86W42 341 aaKnown RBP11.07□□□□□ -0.64
CLK4-206ENST00000520878 ZFAND4Q86XD8 727 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms