RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 LMO3Q8TAP4 145 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 KCNE4Q8WWG9 221 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 FAM131CQ96AQ9 280 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 ARRDC3Q96B67 414 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 ALG14Q96F25 216 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 APIPQ96GX9 242 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 CCDC34Q96HJ3 373 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 APOLD1Q96LR9 279 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 PRMT1Q99873 361 aaKnown RBP5.89□□□□□ -1.47
PABPC1-216ENST00000520868 FEM1AQ9BSK4 669 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.89□□□□□ -1.47
PABPC1-216ENST00000520868 ABCG4Q9H172 646 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 POPDC2Q9HBU9 364 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 METTL14Q9HCE5 456 aaKnown RBP5.89□□□□□ -1.47
PABPC1-216ENST00000520868 PREBQ9HCU5 417 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 UBE2TQ9NPD8 197 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-216ENST00000520868 ACP6Q9NPH0 428 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 SNX15Q9NRS6 342 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 RMND1Q9NWS8 449 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 VPS28Q9UK41 221 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 VANGL2Q9ULK5 521 aa5.89□□□□□ -1.47
PABPC1-216ENST00000520868 COL5A1P20908 1838 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 MYLKQ15746 1914 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 K7ERQ8 282 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 ALOX15BO15296 676 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 THAP12O43422 761 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SMAD6O43541 496 aaKnown RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SNAP91O60641 907 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 GRAP2O75791 330 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 PIAS2O75928 621 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 INMTO95050 263 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SMC2O95347 1197 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 IGLV3-25P01717 112 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SLC2A3P11169 496 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 CKMT1AP12532 417 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SRCP12931 536 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 FPR3P25089 353 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 AKT2P31751 481 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 UQCRC1P31930 480 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 CCR1P32246 355 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 CHRNA3P32297 505 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 DUSP3P51452 185 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 TMPRSS3P57727 454 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 TIRAPP58753 221 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 FMO1Q01740 532 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 RHDQ02161 417 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 GCNT1Q02742 428 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 LRRC63Q05C16 580 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 NME3Q13232 169 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 EIF4EBP2Q13542 120 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SLC29A2Q14542 456 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 ZNF284Q2VY69 593 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 GFOD2Q3B7J2 385 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 RNASE12Q5GAN4 147 aaKnown RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 C3orf38Q5JPI3 329 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SEL1L3Q68CR1 1132 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 OR6B2Q6IFH4 312 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 KLHL10Q6JEL2 608 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 CRTC1Q6UUV9 634 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 GCNT7Q6ZNI0 430 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 Q6ZSR6 202 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 PTCHD4Q6ZW05 846 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 BEND5Q7L4P6 421 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 CHST15Q7LFX5 561 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 TMEM110Q86TL2 294 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 MAPK15Q8TD08 544 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 ADAMTS18Q8TE60 1221 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 IPCEF1Q8WWN9 437 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 ZNF606Q8WXB4 792 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 HIC2Q96JB3 615 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 VCPIP1Q96JH7 1222 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 BMFQ96LC9 184 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 C5orf34Q96MH7 638 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 GSDMAQ96QA5 445 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 TRIM62Q9BVG3 475 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 INTS2Q9H0H0 1204 aaKnown RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 FAM83DQ9H4H8 585 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 THAP9Q9H5L6 903 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 POLR1BQ9H9Y6 1135 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 DYRK4Q9NR20 520 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 DDIT4Q9NX09 232 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 IPO11Q9UI26 975 aaKnown RBP5.88□□□□□ -1.47
PABPC1-216ENST00000520868 SATB2Q9UPW6 733 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 TENM4Q6N022 2769 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 ATMQ13315 3056 aa5.88□□□□□ -1.47
PABPC1-216ENST00000520868 A0A0D9SEW6 157 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 LY6G6EA0A0G2JKS1 128 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 A0A1W2PNU3 283 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 POM121BA6NF01 834 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 NEMP2A6NFY4 417 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 AQP7P3A6NL99 342 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 M0QYT0 321 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PSMA7O14818 248 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 SCAMP1O15126 338 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 CASC3O15234 703 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PMM2O15305 246 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 P4HA2O15460 535 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms