RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 ST8SIA4Q92187 359 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 TDRD1Q9BXT4 1180 aaKnown RBP2.76□□□□□ -1.97
NEDD4-211ENST00000514893 S1PR5Q9H228 398 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 RRP7BPQ9NSQ0 103 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 GTSE1Q9NYZ3 720 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 CACNG4Q9UBN1 327 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 SLC6A5Q9Y345 797 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 H0Y9J4 135 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 TGFB1I1O43294 461 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 POLBP06746 335 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 ATP6V1B1P15313 513 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 RPL21P46778 160 aaKnown RBP2.75□□□□□ -1.97
NEDD4-211ENST00000514893 HNRNPA3P51991 378 aaKnown RBP2.75□□□□□ -1.97
NEDD4-211ENST00000514893 EFTUD2Q15029 972 aaKnown RBP eCLIP2.75□□□□□ -1.97
NEDD4-211ENST00000514893 PCGF3Q3KNV8 242 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 RARS2Q5T160 578 aaKnown RBP2.75□□□□□ -1.97
NEDD4-211ENST00000514893 CHMP1BQ7LBR1 199 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 HAUS6Q7Z4H7 955 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 HJURPQ8NCD3 748 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-211ENST00000514893 OR13C3Q8NGS6 347 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 IRGQQ8WZA9 623 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 HTRA1Q92743 480 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 ATXN7L3BQ96GX2 97 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 POLR1BQ9H9Y6 1135 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 P4HTMQ9NXG6 502 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.75□□□□□ -1.97
NEDD4-211ENST00000514893 WIPI2Q9Y4P8 454 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 LYVE1Q9Y5Y7 322 aa2.75□□□□□ -1.97
NEDD4-211ENST00000514893 TO15178 435 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 NMBRP28336 390 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 ETV5P41161 510 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 PNRC1Q12796 327 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-211ENST00000514893 SQLEQ14534 574 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 MTF1Q14872 753 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 CCBE1Q6UXH8 406 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-211ENST00000514893 CYP26C1Q6V0L0 522 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 G2E3Q7L622 706 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 COMMD2Q86X83 199 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 FAM131BQ86XD5 332 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 EID3Q8N140 333 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 C11orf45Q8TAV5 145 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 ZKSCAN4Q969J2 545 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-211ENST00000514893 NCAPGQ9BPX3 1015 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 AMACRQ9UHK6 382 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 IKZF3Q9UKT9 509 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 STYXL1Q9Y6J8 313 aa2.74□□□□□ -1.97
NEDD4-211ENST00000514893 UMODL1Q5DID0 1318 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 IGHV4-30-2A0A087WSY4 118 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 SHISA7A6NL88 538 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 LY6G6DO95868 133 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 KRT6AP02538 564 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 KRT6BP04259 564 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 PBX3P40426 434 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 KRT6CP48668 564 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 CSNK2BP67870 215 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 MS4A18Q3C1V0 323 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 ITPRIPL2Q3MIP1 535 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 CYP20A1Q6UW02 462 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 CATSPERDQ86XM0 798 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 TMEM139Q8IV31 216 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 TRIML1Q8N9V2 468 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 OR13J1Q8NGT2 312 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 OR52N5Q8NH56 324 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 OR1L3Q8NH93 324 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 METTL6Q8TCB7 284 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 URM1Q9BTM9 101 aaKnown RBP2.73□□□□□ -1.97
NEDD4-211ENST00000514893 PDCL3Q9H2J4 239 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 SPHK1Q9NYA1 384 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 NENFQ9UMX5 172 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 PA2G4Q9UQ80 394 aaKnown RBP2.73□□□□□ -1.97
NEDD4-211ENST00000514893 MTMR6Q9Y217 621 aa2.73□□□□□ -1.97
NEDD4-211ENST00000514893 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.73□□□□□ -1.97
NEDD4-211ENST00000514893 FAM205AQ6ZU69 1335 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 FAM237BA0A1B0GVD1 139 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 NPIPB15A6NHN6 443 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-211ENST00000514893 LRCH4O75427 683 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 CEACAM4O75871 244 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 XBP1P17861 261 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 PDHA2P29803 388 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 SLC25A53Q5H9E4 307 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 INTS11Q5TA45 600 aaKnown RBP2.72□□□□□ -1.97
NEDD4-211ENST00000514893 TMEM198Q66K66 360 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 ARID3BQ8IVW6 561 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-211ENST00000514893 ZNF597Q96LX8 424 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 WDFY2Q96P53 400 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 RPS6KC1Q96S38 1066 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 OR2B2Q9GZK3 357 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 HOXD1Q9GZZ0 328 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 MTUS1Q9ULD2 1270 aa2.72□□□□□ -1.97
NEDD4-211ENST00000514893 H0YAE9 185 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 EIF4A2Q14240 407 aaKnown RBP2.71□□□□□ -1.98
NEDD4-211ENST00000514893 MELKQ14680 651 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 RNLSQ5VYX0 342 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 LCLAT1Q6UWP7 414 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 TIPARPQ7Z3E1 657 aaKnown RBP2.71□□□□□ -1.98
NEDD4-211ENST00000514893 CDK20Q8IZL9 346 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 CD177Q8N6Q3 437 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 FRMD1Q8N878 549 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 POC5Q8NA72 575 aa2.71□□□□□ -1.98
NEDD4-211ENST00000514893 SPAG5Q96R06 1193 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms