RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 UAP1L1Q3KQV9 507 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 SLC9B1Q4ZJI4 515 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 FBXO48Q5FWF7 155 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 VWA5B1Q5TIE3 1220 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 FAM91A1Q658Y4 838 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 RD3Q7Z3Z2 195 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 CLNKQ7Z7G1 428 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 SYVN1Q86TM6 617 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 IQCHQ86VS3 1027 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 THOC6Q86W42 341 aaKnown RBP15.57■□□□□ 0.08
NUP54-214ENST00000514307 MFSD2AQ8NA29 543 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 OR56A3Q8NH54 315 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 OR1E3Q8WZA6 343 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 SNX19Q92543 992 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 NSL1Q96IY1 281 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 MIPEPQ99797 713 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 EBF4Q9BQW3 602 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 TMEM79Q9BSE2 394 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 MYLK2Q9H1R3 596 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 ACTR8Q9H981 624 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 FGF22Q9HCT0 170 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 AASDHPPTQ9NRN7 309 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 TM7SF3Q9NS93 570 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 ABCF3Q9NUQ8 709 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 STOX2Q9P2F5 926 aaPredicted RBP15.57■□□□□ 0.08
NUP54-214ENST00000514307 PSMD13Q9UNM6 376 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 KCNE2Q9Y6J6 123 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 DGKBQ9Y6T7 804 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 PDZK1P1A8MUH7 402 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 PPP6CO00743 305 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 OR7A17O14581 309 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 SLC22A2O15244 555 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 UGDHO60701 494 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 OR4F21O95013 312 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 KRT6AP02538 564 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 KRT6BP04259 564 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 THEGLP0DJG4 465 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 KRT6CP48668 564 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 MNAT1P51948 309 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 ERVPABLB-1P60509 514 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 RPL6Q02878 288 aaKnown RBP15.56■□□□□ 0.08
NUP54-214ENST00000514307 GALNTL6Q49A17 601 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 LIPJQ5W064 366 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 CLEC6AQ6EIG7 209 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 ABRAXAS1Q6UWZ7 409 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 MAVSQ7Z434 540 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 HID1Q8IV36 788 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 DDIASQ8IXT1 998 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 SYTL1Q8IYJ3 562 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 OR4F6Q8NGB9 312 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 OR5K2Q8NHB8 316 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 ERP27Q96DN0 273 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 MAELQ96JY0 434 aaKnown RBP15.56■□□□□ 0.08
NUP54-214ENST00000514307 SLC29A3Q9BZD2 475 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 PCBD2Q9H0N5 130 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 ATG10Q9H0Y0 220 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 WDR55Q9H6Y2 383 aaPredicted RBP15.56■□□□□ 0.08
NUP54-214ENST00000514307 ACTR5Q9H9F9 607 aaPredicted RBP15.56■□□□□ 0.08
NUP54-214ENST00000514307 EBF2Q9HAK2 575 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 MRPL40Q9NQ50 206 aaKnown RBP15.56■□□□□ 0.08
NUP54-214ENST00000514307 TXLNGQ9NUQ3 528 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 SPATA6Q9NWH7 488 aaPredicted RBP15.56■□□□□ 0.08
NUP54-214ENST00000514307 GPRC5BQ9NZH0 403 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 TRPS1Q9UHF7 1281 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 SNX6Q9UNH7 406 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 SLC22A14Q9Y267 594 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 DNAJC15Q9Y5T4 150 aa15.56■□□□□ 0.08
NUP54-214ENST00000514307 SPTY2D1-AS1A0A0U1RR47 76 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 SLC28A1O00337 649 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 SDHDO14521 159 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 ULK1O75385 1050 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 SLC16A8O95907 504 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 EZRP15311 586 aaKnown RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 PCSK2P16519 638 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 GNAZP19086 355 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 EPHA3P29320 983 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 BDKRB1P46663 353 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 PXNP49023 591 aaPredicted RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 PNLIPRP1P54315 467 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 CTBSQ01459 385 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 ZNF33BQ06732 778 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 PCDH1Q08174 1060 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 ILF3Q12906 894 aaKnown RBP eCLIP15.55■□□□□ 0.08
NUP54-214ENST00000514307 BNIP1Q12981 228 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 LSM12Q3MHD2 195 aaKnown RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 WDR45BQ5MNZ6 344 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 MBOAT1Q6ZNC8 495 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 SPATA19Q7Z5L4 167 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 C11orf74Q86VG3 221 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 RGL4Q8IZJ4 473 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 CDYL2Q8N8U2 506 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 OR13H1Q8NG92 308 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 MAPK15Q8TD08 544 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 TWIST2Q8WVJ9 160 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 TSACCQ96A04 125 aaPredicted RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 C19orf60Q96EN9 201 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 MED8Q96G25 268 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 C12orf66Q96MD2 445 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 INSM2Q96T92 566 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms