RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PWP1Q13610 501 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ACOX1Q15067 660 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 TMEM52BQ4KMG9 183 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 USP39Q53GS9 565 aaKnown RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 RABL3Q5HYI8 236 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 C9orf50Q5SZB4 431 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 PRAMEF9Q5VWM5 478 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 TMEM154Q6P9G4 183 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 SLC2A7Q6PXP3 512 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 SLC22A15Q8IZD6 547 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 MARVELD2Q8N4S9 558 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 BEND7Q8N7W2 519 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 PIP4K2CQ8TBX8 421 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 FCRL1Q96LA6 429 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 CLMPQ9H6B4 373 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ITM2BQ9Y287 266 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 TMEM202A6NGA9 273 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ARHGEF33A8MVX0 844 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 GRIA3P42263 894 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 NRIP1P48552 1158 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 HSPA13P48723 471 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 CLCN2P51788 898 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 METAP1P53582 386 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 LIPEQ05469 1076 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 FNDC3BQ53EP0 1204 aaKnown RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF648Q5T619 568 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 FBXO15Q8NCQ5 510 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 DNAJB14Q8TBM8 379 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ZFYVE19Q96K21 471 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 VCXQ9H320 206 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 SCOCQ9UIL1 159 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 YBX2Q9Y2T7 364 aaKnown RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 SNX13Q9Y5W8 968 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 OR2AG2A6NM03 316 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 AP1G1O43747 822 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 LILRB5O75023 590 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 PDYNP01213 254 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 FOLH1Q04609 750 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.2■□□□□ 0.34
SFXN1-208ENST00000507823 CACHD1Q5VU97 1274 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 HMBOX1Q6NT76 420 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 ANKFN1Q8N957 763 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 TERB1Q8NA31 727 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 OR8J3Q8NGG0 315 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 HHIPQ96QV1 700 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 CDCA3Q99618 268 aaPredicted RBP17.2■□□□□ 0.34
SFXN1-208ENST00000507823 TCRBV5S2A0A599 114 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 PABPN1LA6NDY0 278 aaKnown RBP17.2■□□□□ 0.34
SFXN1-208ENST00000507823 BMP2P12643 396 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 E2F2Q14209 437 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 GRM2Q14416 872 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 ZNF234Q14588 700 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 IMPG1Q17R60 797 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 POM121L1PQ3SYA9 428 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 LIPJQ5W064 366 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 OR52E8Q6IFG1 317 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 ERMP1Q7Z2K6 904 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 PAPD5Q8NDF8 572 aaKnown RBP17.2■□□□□ 0.34
SFXN1-208ENST00000507823 CANT1Q8WVQ1 401 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 ATL1Q8WXF7 558 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 LRTOMTQ8WZ04 291 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 ZBTB18Q99592 522 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 CGREF1Q99674 301 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 TMED5Q9Y3A6 229 aa17.2■□□□□ 0.34
SFXN1-208ENST00000507823 NPC1O15118 1278 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 IL6P05231 212 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 GPIP06744 558 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 JUPP14923 745 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 FCHO2Q0JRZ9 810 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 INPP5AQ14642 412 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 FBXL19Q6PCT2 694 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 SUSD1Q6UWL2 747 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 GPR149Q86SP6 731 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 ADGRG5Q8IZF4 528 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 FAM9CQ8IZT9 166 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 LIX1Q8N485 282 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 SKA2Q8WVK7 121 aaPredicted RBP17.19■□□□□ 0.34
SFXN1-208ENST00000507823 SLC13A3Q8WWT9 602 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 TMEM159Q96B96 161 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 CMTM7Q96FZ5 175 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 CCDC138Q96M89 665 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 CXorf56Q9H5V9 222 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 THG1LQ9NWX6 298 aaKnown RBP17.19■□□□□ 0.34
SFXN1-208ENST00000507823 GULP1Q9UBP9 304 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 SLC22A14Q9Y267 594 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 ZNF839A8K0R7 811 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 PRPS2P11908 318 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 BCKDHAP12694 445 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 HLA-EP13747 358 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 ADRB3P13945 408 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 HNRNPFP52597 415 aaKnown RBP17.19■□□□□ 0.34
SFXN1-208ENST00000507823 PTGR1Q14914 329 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 CPSF6Q16630 551 aaKnown RBP eCLIP17.19■□□□□ 0.34
SFXN1-208ENST00000507823 GTF2H4Q92759 462 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
SFXN1-208ENST00000507823 KCTD14Q9BQ13 255 aaPredicted RBP17.19■□□□□ 0.34
SFXN1-208ENST00000507823 ZNHIT2Q9UHR6 403 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 PCDHB3Q9Y5E6 796 aa17.19■□□□□ 0.34
SFXN1-208ENST00000507823 DHRS12A0PJE2 317 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 DPPA5A6NC42 116 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms