RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CD46P15529 392 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF16P17020 682 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CTPS1P17812 591 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 BMP5P22003 454 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CEACAM8P31997 349 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ACVR1BP36896 505 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 OR1D4P47884 311 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF136P52737 540 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 COL10A1Q03692 680 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 BCL2L1Q07817 233 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 NSUN2Q08J23 767 aaKnown RBP eCLIP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 MEA1Q16626 185 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 INSCQ1MX18 579 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 TDRD12Q587J7 1177 aaKnown RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 AWAT1Q58HT5 328 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 FKBP15Q5T1M5 1219 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ACBD5Q5T8D3 534 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 SLC25A25Q6KCM7 469 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 TLDC1Q6P9B6 456 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CNSTQ6PJW8 725 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 UNC5DQ6UXZ4 953 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 NLRP9Q7RTR0 991 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 DAAM2Q86T65 1068 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 FAM131BQ86XD5 332 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CRLF3Q8IUI8 442 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 GPR135Q8IZ08 494 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PGBD5Q8N414 524 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 DNAJC22Q8N4W6 341 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 RTL3Q8N8U3 475 aaKnown RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ZFP62Q8NB50 900 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 NUP43Q8NFH3 380 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 STT3BQ8TCJ2 826 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 EID2BQ96D98 161 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CLIC6Q96NY7 704 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PLCD4Q9BRC7 762 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CNPPD1Q9BV87 410 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF700Q9H0M5 742 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 SLCO5A1Q9H2Y9 848 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 LRRC19Q9H756 370 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 TRIM45Q9H8W5 580 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ZDHHC11Q9H8X9 412 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 SLC39A2Q9NP94 309 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 RIC8BQ9NVN3 520 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PSD3Q9NYI0 1048 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 UBA2Q9UBT2 640 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 OR12D3Q9UGF7 316 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 C3orf18Q9UK00 162 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 NXT1Q9UKK6 140 aaKnown RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 TMPRSS11EQ9UL52 423 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CNTN6Q9UQ52 1028 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 TESMINQ9Y4I5 508 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PCDHGB1Q9Y5G3 927 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 WIF1Q9Y5W5 379 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 LIPGQ9Y5X9 500 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CFAP20Q9Y6A4 193 aaKnown RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 SCN3AQ9NY46 2000 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 IGHV4-30-2A0A087WSY4 118 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 A0A1B0GVC2 190 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 GSAPA4D1B5 854 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PINLYPA6NC86 204 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 OR14I1A6ND48 311 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 FIGNL2A6NMB9 653 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 C2orf81A6NN90 581 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 GABRR3A8MPY1 467 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 QSOX1O00391 747 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PDXKO00764 312 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TFECO14948 347 aaPredicted RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 DSCR3O14972 297 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 KMOO15229 486 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SLC16A3O15427 465 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 KLRC4O43908 158 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 FZD6O60353 706 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 OR10H2O60403 315 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PRMT3O60678 531 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SOCS5O75159 536 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 NDUFS7O75251 213 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 MTX2O75431 263 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PGLSO95336 258 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PEX11BO96011 259 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CPP00450 1065 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 IGHG3P01860 377 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CYP2A6P11509 494 aaPredicted RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CREB1P16220 341 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ENDOUP21128 410 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 MCM3P25205 808 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 OPRM1P35372 400 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 FLT3P36888 993 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 STAT6P42226 847 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CARSP49589 748 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SULT1E1P49888 294 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 MXI1P50539 228 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 RAB28P51157 221 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 WNT3P56703 355 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 YBEYP58557 167 aaPredicted RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 DCDC1P59894 354 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 AP1S1P61966 158 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 POU4F1Q01851 419 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 DEUP1Q05D60 604 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 FOXO1Q12778 655 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms