RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 PROSER1Q86XN7 944 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 FBXO39Q8N4B4 442 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 NKAPQ8N5F7 415 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 OR2L8Q8NGY9 312 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 OR8K5Q8NH50 307 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 TSPAN17Q96FV3 270 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 CYTH2Q99418 400 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 RBBP8Q99708 897 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 SLC30A3Q99726 388 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 HGH1Q9BTY7 390 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 SLC12A9Q9BXP2 914 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 TXLNGYQ9BZA5 131 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 FAM117AQ9C073 453 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 CDC42EP4Q9H3Q1 356 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 CCDC86Q9H6F5 360 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 SMYD2Q9NRG4 433 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 TXNDC16Q9P2K2 825 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 FAM8A1Q9UBU6 413 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 SATB2Q9UPW6 733 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 ICKQ9UPZ9 632 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 PSAT1Q9Y617 370 aa10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 TPRP12270 2363 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-212ENST00000502563 FAM95CA0A1B0GW59 222 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 PIPSLA2A3N6 862 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 OR6C74A6NCV1 312 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 BTN3A1O00481 513 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 CASC3O15234 703 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 ZBTB14O43829 449 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 PRICKLE3O43900 615 aaPredicted RBP10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 JMJD7P0C870 316 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 TPBGLP0DKB5 382 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 TYRP1P17643 537 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 ITGB6P18564 788 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 RBMS1P29558 406 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 CSRP3P50461 194 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 CDKN2DP55273 166 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 GFERP55789 205 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 AP1S2P56377 157 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 CLDN6P56747 220 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 IL2P60568 153 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 HSD11B2P80365 405 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 MC2RQ01718 297 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 RELAQ04206 551 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 BRD3Q15059 726 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 C3orf38Q5JPI3 329 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 CDKL4Q5MAI5 379 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 DNTTIP2Q5QJE6 756 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 RBM20Q5T481 1227 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 PHF19Q5T6S3 580 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 SPESP1Q6UW49 350 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 CCDC25Q86WR0 208 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 D2HGDHQ8N465 521 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 SIDT2Q8NBJ9 832 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 OR4E2Q8NGC2 313 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 FLVCR1-AS1Q8TAF5 88 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 FBF1Q8TES7 1133 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 FGF11Q92914 225 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 ISL2Q96A47 359 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 TAAR9Q96RI9 348 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 SYNDIG1Q9H7V2 258 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 NINJ2Q9NZG7 142 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 ANKMY1Q9P2S6 941 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 GALPQ9UBC7 116 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 LNPEPQ9UIQ6 1025 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 ZNF180Q9UJW8 692 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 PCDHB11Q9Y5F2 797 aa10.39□□□□□ -0.75
UBE2D3-212ENST00000502563 ARHGEF33A8MVX0 844 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CXorf49A8MYA2 514 aaPredicted RBP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 TARM1B6A8C7 271 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 BTN3A3O00478 584 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 BRINP1O60477 761 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 SLU7O95391 586 aaKnown RBP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 MPOP05164 745 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 TUBBP07437 444 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CHRM5P08912 532 aaPredicted RBP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 FGF3P11487 239 aaPredicted RBP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 FGF5P12034 268 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CNTFP26441 200 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 PRDX3P30048 256 aaKnown RBP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 KPNA2P52292 529 aaKnown RBP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CDKL1Q00532 357 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 ACY1Q03154 408 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 ABRQ12979 859 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 MAP7Q14244 749 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CACHD1Q5VU97 1274 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 IRGCQ6NXR0 463 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 PAQR3Q6TCH7 311 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CEACAM20Q6UY09 585 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 NAPRTQ6XQN6 538 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 CPNE9Q8IYJ1 553 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 MYO1HQ8N1T3 1032 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 LINC01555Q8NAE3 123 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 OR9A1PQ8NGU1 263 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 IFT81Q8WYA0 676 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 ZUFSPQ96AP4 578 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 UBXN10Q96LJ8 280 aa10.38□□□□□ -0.75
UBE2D3-212ENST00000502563 TGM7Q96PF1 710 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms