RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 GKAP1Q5VSY0 366 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 CAPRIN2Q6IMN6 1127 aaKnown RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 KLHDC8AQ8IYD2 350 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 SLC22A18ASQ8N1D0 253 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 CCNYL1Q8N7R7 359 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 MFSD2AQ8NA29 543 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 PIWIL2Q8TC59 973 aaKnown RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 PDXPQ96GD0 296 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 HIST1H2AHQ96KK5 128 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 SLC6A18Q96N87 628 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 SIKE1Q9BRV8 207 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 H2AFJQ9BTM1 129 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 ZDHHC5Q9C0B5 715 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 ZNF395Q9H8N7 513 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 CARS2Q9HA77 564 aaKnown RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 IL21RQ9HBE5 538 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 TM9SF3Q9HD45 589 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 TRNAU1APQ9NX07 287 aaKnown RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 UTP6Q9NYH9 597 aaKnown RBP13.82□□□□□ -0.2
VPS26A-209ENST00000497564 KLHL14Q9P2G3 628 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 SUSD2Q9UGT4 822 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 PCTPQ9UKL6 214 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 PCNX2A6NKB5 2137 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 ASPMQ8IZT6 3477 aa13.82□□□□□ -0.2
VPS26A-209ENST00000497564 ACACBO00763 2458 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 SPTY2D1-AS1A0A0U1RR47 76 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 A0A1B0GVT2 93 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 A0A1W2PR77 199 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 PABPN1LA6NDY0 278 aaKnown RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 NCF1BA6NI72 391 aaPredicted RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 NCF1CA8MVU1 366 aaPredicted RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 MYO1CO00159 1063 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 TAPBPO15533 448 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 SUPT7LO94864 414 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 KCNK5O95279 499 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 C1orf105O95561 183 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 THEGLP0DJG4 465 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 NCF1P14598 390 aaPredicted RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 GNSP15586 552 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 MAP4P27816 1152 aaKnown RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 AGTR2P50052 363 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 SRP54P61011 504 aaKnown RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 ALG11Q2TAA5 492 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 WASH2PQ6VEQ5 465 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 SPATA21Q7Z572 469 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 RABEPKQ7Z6M1 372 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 FBXL8Q96CD0 374 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 KLHDC7BQ96G42 594 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 RMDN2Q96LZ7 410 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 CCDC138Q96M89 665 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 EGFL8Q99944 293 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 ELAC2Q9BQ52 826 aaKnown RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 TMEM79Q9BSE2 394 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 ILKAPQ9H0C8 392 aaPredicted RBP13.81□□□□□ -0.2
VPS26A-209ENST00000497564 RABEP2Q9H5N1 569 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 WASH6PQ9NQA3 447 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 ARL15Q9NXU5 204 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 MOSPD1Q9UJG1 213 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 DNAJC16Q9Y2G8 782 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 GPSM3Q9Y4H4 160 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 HEATR5BQ9P2D3 2071 aa13.81□□□□□ -0.2
VPS26A-209ENST00000497564 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 IFRD1O00458 451 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-209ENST00000497564 E2F3O00716 465 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 GUCA1CO95843 209 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 RPN2P04844 631 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 CHRNGP07510 517 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 SLC35G4P0C7Q5 338 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 ALOX15P16050 662 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-209ENST00000497564 IDSP22304 550 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 CD38P28907 300 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 SLC6A12P48065 614 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 ATXN3P54252 364 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-209ENST00000497564 CLCQ05315 142 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 LCP2Q13094 533 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 FZD2Q14332 565 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 ZNF781Q8N8C0 355 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 STON2Q8WXE9 905 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 ATL1Q8WXF7 558 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 MOCOSQ96EN8 888 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 WWP1Q9H0M0 922 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 AASDHPPTQ9NRN7 309 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 PCOLCE2Q9UKZ9 415 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 PNMA8BQ9ULN7 279 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-209ENST00000497564 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
VPS26A-209ENST00000497564 SNRNP200O75643 2136 aaKnown RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 WDFY3Q8IZQ1 3526 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 LRRC14BA6NHZ5 514 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 SLCO1B7G3V0H7 640 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms