RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RD3Q7Z3Z2 195 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 UNC45BQ8IWX7 931 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 TBC1D3Q8IZP1 549 aaPredicted RBP6.49□□□□□ -1.37
VIM-207ENST00000495528 SIX6OS1Q8N1H7 587 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 ZNF843Q8N446 348 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 CARNMT1Q8N4J0 409 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 AADATQ8N5Z0 425 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 LSM14AQ8ND56 463 aaKnown RBP6.49□□□□□ -1.37
VIM-207ENST00000495528 OR8K1Q8NGG5 319 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 OR2T34Q8NGX1 318 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 CLEC4CQ8WTT0 213 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 FGF11Q92914 225 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 MUL1Q969V5 352 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 AZIN2Q96A70 460 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 SLC39A13Q96H72 371 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 WDYHV1Q96HA8 205 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 SERAC1Q96JX3 654 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 PRICKLE1Q96MT3 831 aaPredicted RBP6.49□□□□□ -1.37
VIM-207ENST00000495528 SPAG5Q96R06 1193 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 STK33Q9BYT3 514 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 EDEM3Q9BZQ6 932 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 CNGB3Q9NQW8 809 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 GDF3Q9NR23 364 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 STEAP1Q9UHE8 339 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 TAGLN3Q9UI15 199 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 SLC39A10Q9ULF5 831 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 ERVW-1Q9UQF0 538 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 BPTFQ12830 3046 aa6.49□□□□□ -1.37
VIM-207ENST00000495528 TMEM131Q92545 1883 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 O00370 1275 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 YKT6O15498 198 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 IRAK2O43187 625 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 PEX14O75381 377 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 GFPT2O94808 682 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 FYNP06241 537 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 SRPRAP08240 638 aaKnown RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 PNMA6AP0CW24 399 aaPredicted RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 VDRP11473 427 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 GOT1P17174 413 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 TBXAS1P24557 533 aaPredicted RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 MST1P26927 711 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 DRD3P35462 400 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 STAT1P42224 750 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 HTR3AP46098 478 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 PSMD8P48556 350 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ARRB1P49407 418 aaPredicted RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 NUMBP49757 651 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 METAP1P53582 386 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ADPRHP54922 357 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 TLE3Q04726 772 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 CCDC173Q0VFZ6 552 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 FHL3Q13643 280 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 TRIM14Q14142 442 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 DCAF6Q58WW2 860 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 MS4A13Q5J8X5 152 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 SFMBT2Q5VUG0 894 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 NUGGCQ68CJ6 796 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ABLIM2Q6H8Q1 611 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 TMEM270Q6UE05 265 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ENOSF1Q7L5Y1 443 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ERICH1Q86X53 443 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ADGRG3Q86Y34 549 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 APCDD1Q8J025 514 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 SCML4Q8N228 414 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 STK40Q8N2I9 435 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 TC2NQ8N9U0 490 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 KDM1BQ8NB78 822 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 HJURPQ8NCD3 748 aaPredicted RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 MBD3L2Q8NHZ7 208 aaPredicted RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 SLC35F5Q8WV83 523 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 SARAFQ96BY9 339 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 CTHRC1Q96CG8 243 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 GRAMD1AQ96CP6 724 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ZDHHC12Q96GR4 267 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 ZNF830Q96NB3 372 aaPredicted RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 ERVMER34-1Q9H9K5 563 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 MGAT4CQ9UBM8 478 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 XPO7Q9UIA9 1087 aaKnown RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 FZD4Q9ULV1 537 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 LRCH1Q9Y2L9 728 aa6.48□□□□□ -1.37
VIM-207ENST00000495528 FLNBO75369 2602 aaKnown RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 GCN1Q92616 2671 aaKnown RBP6.48□□□□□ -1.37
VIM-207ENST00000495528 MUC22E2RYF6 1773 aaPredicted RBP6.47□□□□□ -1.37
VIM-207ENST00000495528 EDDM13A0A1B0GTR0 161 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 LRRC53A6NM62 1247 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 CYSRT1A8MQ03 144 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 TARM1B6A8C7 271 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 TRIM38O00635 465 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 CAPN9O14815 690 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 ZSCAN9O15535 394 aaPredicted RBP6.47□□□□□ -1.37
VIM-207ENST00000495528 LATO43561 262 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 SDC3O75056 442 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 TJP3O95049 919 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 LUC7L3O95232 432 aaKnown RBP6.47□□□□□ -1.37
VIM-207ENST00000495528 MT-CO3P00414 261 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 IL1BP01584 269 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 EGR1P18146 543 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 WT1P19544 449 aaPredicted RBP6.47□□□□□ -1.37
VIM-207ENST00000495528 ACP1P24666 158 aa6.47□□□□□ -1.37
VIM-207ENST00000495528 MAT2AP31153 395 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms