RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SAT2Q96F10 170 aaPredicted RBP3.53□□□□□ -1.84
SMC4-223ENST00000493695 NUDCD1Q96RS6 583 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 TRAF4Q9BUZ4 470 aaPredicted RBP3.53□□□□□ -1.84
SMC4-223ENST00000493695 MXD3Q9BW11 206 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 OSGEPL1Q9H4B0 414 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 DENND2DQ9H6A0 471 aaPredicted RBP3.53□□□□□ -1.84
SMC4-223ENST00000493695 ANKEF1Q9NU02 776 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 INTS9Q9NV88 658 aaKnown RBP3.53□□□□□ -1.84
SMC4-223ENST00000493695 MIOSQ9NXC5 875 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 GPR83Q9NYM4 423 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 CLIC5Q9NZA1 410 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 MORF4L1Q9UBU8 362 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 TSPYL4Q9UJ04 414 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 DBNLQ9UJU6 430 aaKnown RBP3.53□□□□□ -1.84
SMC4-223ENST00000493695 TTLL3Q9Y4R7 772 aa3.53□□□□□ -1.84
SMC4-223ENST00000493695 KLF2Q9Y5W3 355 aaPredicted RBP3.53□□□□□ -1.84
SMC4-223ENST00000493695 LOC102723996A0A087X1L8 192 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 TEX13DA0A0J9YY54 714 aaPredicted RBP3.52□□□□□ -1.85
SMC4-223ENST00000493695 LRRC72A6NJI9 287 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 KPNA7A9QM74 516 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 UGT1A4P22310 534 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 NRIP1P48552 1158 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 GPR17Q13304 367 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 DRP2Q13474 957 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 DLG2Q15700 870 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 WLSQ5T9L3 541 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 GARNL3Q5VVW2 1013 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 DENND5BQ6ZUT9 1274 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 AACSQ86V21 672 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 GPALPP1Q8IXQ4 340 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 SLC39A11Q8N1S5 342 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 TMTC2Q8N394 836 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 GSDMBQ8TAX9 411 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 PRPF31Q8WWY3 499 aaKnown RBP3.52□□□□□ -1.85
SMC4-223ENST00000493695 MOAP1Q96BY2 351 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 KIFC3Q9BVG8 833 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 MRPL1Q9BYD6 325 aaKnown RBP3.52□□□□□ -1.85
SMC4-223ENST00000493695 PSD3Q9NYI0 1048 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 RCC2Q9P258 522 aaKnown RBP3.52□□□□□ -1.85
SMC4-223ENST00000493695 ZDHHC2Q9UIJ5 367 aa3.52□□□□□ -1.85
SMC4-223ENST00000493695 ATRXP46100 2492 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 LOC100509620A0A075B734 347 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 TMEM189-UBE2V1I3L0A0 370 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 RTL8CO15255 209 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 ADAM20O43506 726 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 CREG1O75629 220 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 H1F0P07305 194 aaKnown RBP3.51□□□□□ -1.85
SMC4-223ENST00000493695 AKR1B1P15121 316 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 NNMTP40261 264 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 ELAVL2Q12926 359 aaKnown RBP3.51□□□□□ -1.85
SMC4-223ENST00000493695 UBE2V1Q13404 147 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 KCTD2Q14681 263 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 P2RY6Q15077 328 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 TOMM20Q15388 145 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 CORO6Q6QEF8 472 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 IL27RAQ6UWB1 636 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 MINDY1Q8N5J2 469 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 LSMEM1Q8N8F7 131 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 OR2T11Q8NH01 316 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMC4-223ENST00000493695 ARHGEF38Q9NXL2 777 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 NKIRAS2Q9NYR9 191 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 AMACRQ9UHK6 382 aa3.51□□□□□ -1.85
SMC4-223ENST00000493695 PTRH2Q9Y3E5 179 aaKnown RBP3.51□□□□□ -1.85
SMC4-223ENST00000493695 GPR75-ASB3A0A0A6YYF3 556 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 OR2M5A3KFT3 312 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 J3QR06 171 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 AVILO75366 819 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 RSL1D1O76021 490 aaKnown RBP3.5□□□□□ -1.85
SMC4-223ENST00000493695 STARD3NLO95772 234 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 MAGEA11P43364 429 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 SIRPAP78324 504 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 HLA-BQ31612 363 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 PSRC1Q6PGN9 363 aaPredicted RBP3.5□□□□□ -1.85
SMC4-223ENST00000493695 GALNT13Q8IUC8 556 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 LSMEM2Q8N112 164 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 Q8N377 158 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 ARHGAP45Q92619 1136 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 ZNF622Q969S3 477 aaKnown RBP eCLIP3.5□□□□□ -1.853e-10■□□□□ 10.5
SMC4-223ENST00000493695 JAKMIP2Q96AA8 810 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 PAFAH2Q99487 392 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 RTN4RQ9BZR6 473 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 SPATC1LQ9H0A9 340 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 KCNK15Q9H427 330 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 CHST11Q9NPF2 352 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 GDE1Q9NZC3 331 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 FLRT3Q9NZU0 649 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 CRNNQ9UBG3 495 aaPredicted RBP3.5□□□□□ -1.85
SMC4-223ENST00000493695 EPHA6Q9UF33 1036 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 RPS6KA6Q9UK32 745 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 ZNF148Q9UQR1 794 aa3.5□□□□□ -1.85
SMC4-223ENST00000493695 KLLNB2CW77 178 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 NDUFS4O43181 175 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 PLOD3O60568 738 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 GCNT3O95395 438 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 SAT1P21673 171 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 ARSEP51690 589 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 STAT2P52630 851 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 PRKAA1Q13131 559 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms