RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 DNAJC21Q5F1R6 531 aaKnown RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 ZRANB3Q5FWF4 1079 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 SLC6A19Q695T7 634 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 FBXO38Q6PIJ6 1188 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 UNC5AQ6ZN44 842 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 TAS2R42Q7RTR8 314 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 MRGPREQ86SM8 312 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 IQCKQ8N0W5 287 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 LILRA3Q8N6C8 439 aaPredicted RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 RBMXL3Q8N7X1 1067 aaKnown RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 Q8NA96 180 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 CLEC1AQ8NC01 280 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PHC3Q8NDX5 983 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 OR2Y1Q8NGV0 311 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 OR5K2Q8NHB8 316 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 CCDC110Q8TBZ0 833 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 N4BP2L2Q92802 583 aaPredicted RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 PEX13Q92968 403 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 SLC22A18Q96BI1 424 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PTERQ96BW5 349 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 RNF31Q96EP0 1072 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PPM1MQ96MI6 270 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 GBP5Q96PP8 586 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 OR2A14Q96R47 310 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PANX2Q96RD6 677 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 APOL2Q9BQE5 337 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 NUDT9Q9BW91 350 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 RASSF4Q9H2L5 321 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 GOLPH3Q9H4A6 298 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 GPN3Q9UHW5 284 aaPredicted RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 B3GNT3Q9Y2A9 372 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 SPENQ96T58 3664 aaKnown RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 NBASA2RRP1 2371 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 DOPEY2Q9Y3R5 2298 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 A0A0J9YY10 115 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 SLC5A10A0PJK1 596 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 MIF4GDA9UHW6 222 aaKnown RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 TCP11X1B4DZS4 312 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ZNF185O15231 689 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ALBP02768 609 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 RPN2P04844 631 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 CHRM5P08912 532 aaPredicted RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 OR56A5P0C7T3 313 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 UGT2B7P16662 529 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 PPARGP37231 505 aaPredicted RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 FOLR3P41439 243 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 LMAN1P49257 510 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ARSFP54793 590 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 TMPRSS15P98073 1019 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ATP1A4Q13733 1029 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 DBN1Q16643 649 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 PTCHD3Q3KNS1 767 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 DCAF10Q5QP82 559 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 PRAMEF17Q5VTA0 474 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 YOD1Q5VVQ6 348 aaPredicted RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 ARHGEF18Q6ZSZ5 1173 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 NLRP9Q7RTR0 991 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 TRIM73Q86UV7 250 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 LURAP1LQ8IV03 231 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 TXLNBQ8N3L3 684 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 GALNT16Q8N428 558 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 DNAJC22Q8N4W6 341 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 CLDN19Q8N6F1 224 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 UBL4BQ8N7F7 174 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 DLG3Q92796 817 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 FKBP10Q96AY3 582 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 MRFAP1L1Q96HT8 127 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 VPS50Q96JG6 964 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 DNAJC1Q96KC8 554 aaKnown RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 BARD1Q99728 777 aaKnown RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 TSSK1BQ9BXA7 367 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 FAM96AQ9H5X1 160 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 C10orf88Q9H8K7 445 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ATP13A2Q9NQ11 1180 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 IL1RAPL1Q9NZN1 696 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 FAM8A1Q9UBU6 413 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 NDOR1Q9UHB4 597 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 PLCL2Q9UPR0 1127 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ICKQ9UPZ9 632 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 ASF1AQ9Y294 204 aa8.81□□□□□ -1
HDAC3-212ENST00000492407 EPN1Q9Y6I3 576 aaPredicted RBP8.81□□□□□ -1
HDAC3-212ENST00000492407 TEX15Q9BXT5 2789 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 hCG_2014768A0A024R1R8 64 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 MACROD2A1Z1Q3 448 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 BHMG1C9JSJ3 638 aaPredicted RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 ZSCAN9O15535 394 aaPredicted RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 CBX6O95503 412 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 GAS8O95995 478 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 CBSLP0DN79 551 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 MSNP26038 577 aaKnown RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 CBSP35520 551 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 GCGRP47871 477 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 CDKN1CP49918 316 aaPredicted RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 RAB28P51157 221 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 CDH17Q12864 832 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 PRKG2Q13237 762 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 OLIG2Q13516 323 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 NKAIN1Q4KMZ8 207 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms